Co-expression analysis

Gene ID Zm.19061.1.A1_at
Gene name hypothetical protein LOC100193436
Homology with ArabidopsisSimilar to At3g62370: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.43
%ile 49.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4455.70.94Zm.19061.1.A1_atCO532046hypothetical protein LOC100193436-5e+0At3g62370unknown proteinO.I.H.G.S.X.
0.5775.10.95Zm.15432.1.S1_atCA401222--9e+0At5g02080DNA/panthothenate metabolism flavoprotein family proteinO.I.H.G.S.X.
0.5065.70.96Zm.33.1.S1_s_atM12144.1alpha zein 19kDa D1 /// alpha zein 19kDa D2 /// hypothetical protein LOC100101516 /// z1D alpha zein protein /// z1D alpha zein protein /// z1D alpha zein protein /// z1D alpha zein protein /// z1A alpha zein protein-7e-1At1g18265unknown proteinO.I.H.G.S.X.
0.4455.70.97Zm.3952.1.S1_atAW155692--1e-4At2g19950GC1 (Golgin Candidate 1)O.I.H.G.S.X.
0.3131.60.96Zm.17102.1.A1_atCD527578Histone H3.2-4e-29At1g09200histone H3O.I.H.G.S.X.
0.2828.10.95Zm.5323.1.A1_atCK827563hypothetical protein LOC100194352-2e+0At4g13968-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.698.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
6.697.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.200114.1.S1_at, orthologous to the query gene, Zm.19061.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9799.9PtpAffx.200114.1.S1_atAt3g62370hypothetical protein-2e-1At1g28040protein binding / zinc ion bindingO.I.H.G.S.X.
0.3964.6PtpAffx.37524.2.S1_a_atAt3g62370hypothetical protein-2e+0At4g31940CYP82C4O.I.H.G.S.X.
0.3661.6PtpAffx.25513.1.A1_atAt3g62370magnesium transporter-3e-5At2g03620magnesium transporter CorA-like family protein (MRS2-5)O.I.H.G.S.X.
0.3559.7PtpAffx.5797.1.A1_atAt3g62370hypothetical protein-5e-10At2g21770CESA9 (CELLULOSE SYNTHASE A9)O.I.H.G.S.X.
0.3458.3PtpAffx.3010.1.A1_atAt3g62370hypothetical protein-3e+0At4g10895Expressed proteinO.I.H.G.S.X.
0.3255.2PtpAffx.110145.1.A1_atAt3g62370hypothetical protein-1e+0At2g47060serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.3255.2Ptp.7898.1.S1_atAt3g62370--9e+0At5g38370zinc ion bindingO.I.H.G.S.X.
0.3052.0PtpAffx.217986.1.S1_s_atAt3g62370hypothetical protein-1e-1At5g35810-O.I.H.G.S.X.
0.2950.5Ptp.502.1.S1_s_atAt3g62370hypothetical protein-4e-50At1g13170ORP1D (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1D)O.I.H.G.S.X.
0.2950.5Ptp.449.1.A1_atAt3g62370hypothetical protein-4e+0At4g14145unknown proteinO.I.H.G.S.X.
0.2950.5PtpAffx.7186.1.S1_atAt3g62370--8e-2At1g76210unknown proteinO.I.H.G.S.X.
0.2850.5PtpAffx.212516.1.S1_atAt3g62370hypothetical protein-1e+0At4g04840methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinO.I.H.G.S.X.
0.2543.6PtpAffx.102489.1.S1_a_atAt3g62370hypothetical protein-2e-28At4g35640ATSERAT3O.I.H.G.S.X.
0.2543.6Ptp.948.1.S1_atAt3g62370hypothetical protein-5e-4At3g13040myb family transcription factorO.I.H.G.S.X.
0.2543.6Ptp.2812.1.S1_atAt3g62370--4e-1At1g24735O-methyltransferaseO.I.H.G.S.X.
0.2441.8Ptp.3178.1.S1_atAt3g62370hypothetical protein-5e+0At5g06430thioredoxin-relatedO.I.H.G.S.X.
0.2441.8Ptp.1765.1.A1_atAt3g62370hypothetical protein-3e-1Atcg00800-O.I.H.G.S.X.
0.2441.8PtpAffx.105685.1.S1_atAt3g62370--1e-6At4g33350chloroplast inner membrane import protein Tic22, putativeO.I.H.G.S.X.
0.2441.8PtpAffx.2396.1.S1_atAt3g62370hypothetical protein-6e-1At2g45600hydrolaseO.I.H.G.S.X.
0.2340.5PtpAffx.99816.1.A1_atAt3g62370hypothetical protein-6e-1At1g76070unknown proteinO.I.H.G.S.X.
0.2340.5Ptp.832.1.S1_atAt3g62370hypothetical protein-2e-6At2g43940thiol methyltransferase, putativeO.I.H.G.S.X.
0.2238.3PtpAffx.149230.1.S1_atAt3g62370hypothetical protein-1e-24At2g45770CPFTSYO.I.H.G.S.X.
0.2034.6PtpAffx.135999.1.A1_atAt3g62370hypothetical protein-7e-1At1g18050SWAP (Suppressor-of-White-APricot)/surp domain-containing proteinO.I.H.G.S.X.
0.2034.6PtpAffx.24508.3.S1_a_atAt3g62370hypothetical protein-2e-56At5g20070ATNUDX19 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 19)O.I.H.G.S.X.
0.1932.7Ptp.8005.1.S1_atAt3g62370hypothetical protein-4e-1At5g35180phosphoinositide bindingO.I.H.G.S.X.
0.1830.8PtpAffx.103430.1.A1_atAt3g62370hypothetical protein-4e-17At4g24250MLO13 (MILDEW RESISTANCE LOCUS O 13)O.I.H.G.S.X.
0.1830.8PtpAffx.4965.1.A1_atAt3g62370--2e-4At4g35790ATPLDDELTAO.I.H.G.S.X.
0.1626.9Ptp.3134.1.S1_atAt3g62370hypothetical protein-1e-5At5g43710glycoside hydrolase family 47 proteinO.I.H.G.S.X.
0.1423.5Ptp.3207.1.S1_atAt3g62370hypothetical protein-7e-13At2g35680dual specificity protein phosphatase family proteinO.I.H.G.S.X.
0.1321.6Ptp.2947.1.S1_atAt3g62370hypothetical protein-1e-1At4g24973-O.I.H.G.S.X.
0.1219.6Ptp.6241.1.S1_atAt3g62370hypothetical protein-3e-1At3g22300RPS10 (RIBOSOMAL PROTEIN S10)O.I.H.G.S.X.
0.1118.1Ptp.3423.1.S1_atAt3g62370hypothetical protein-5e-1At3g14560unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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