Co-expression analysis

Gene ID	Zm.1906.1.S1_at
Gene name	protein kinase CK2 regulatory subunit CK2B3
Homology with Arabidopsis	Similar to At3g60250: CKB3 (HF=4e-33)
Module size	6 genes
NF	0.34
%ile	35.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	65.7	0.93	Zm.1906.1.S1_at	AF239818.1	protein kinase CK2 regulatory subunit CK2B3	-	4e-33	At3g60250	CKB3	O.I.	H.G.	S.X.	Please select
0.83	95.6	0.92	Zm.5804.1.A1_a_at	CF626917	hypothetical protein LOC100275467	-	4e-1	At4g18970	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.93	Zm.17617.1.A1_at	CF623344	hypothetical protein LOC100276896	-	8e-2	At5g53045	-	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.93	Zm.18995.1.A1_at	CO528199	-	-	3e-1	At1g47960	C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1)	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.93	Zm.16498.1.S1_a_at	AY103577.1	hypothetical protein LOC100193260	-	1e-109	At5g55190	RAN3 (RAN GTPASE 3)	O.I.	H.G.	S.X.	Please select
0.11	5.3	0.94	Zm.13645.1.S1_at	CF003014	tryptophan synthase alpha	-	4e-4	At3g54640	TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.0	98.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
6.4	97.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.9	96.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM162264	Mutant 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.8	96.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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