Co-expression analysis

Gene ID Zm.19034.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g32900: aminoacyl-tRNA hydrolase (HF=1e+1)
Module size 10 genes
NF 0.46
%ile 55.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6481.70.95Zm.19034.1.S1_atBQ833817--1e+1At4g32900aminoacyl-tRNA hydrolaseO.I.H.G.S.X.
0.6077.80.97ZmAffx.934.1.A1_atAI795526--2e-1At2g45990unknown proteinO.I.H.G.S.X.
0.5369.10.97Zm.11708.1.A1_atBM380110hypothetical protein LOC100279180-5e+0At3g61530PANB2O.I.H.G.S.X.
0.4658.40.97Zm.174.1.A1_atAF073330.1replication origin activator 2-1e-83At5g46280DNA replication licensing factor, putativeO.I.H.G.S.X.
0.4658.40.97Zm.4483.1.A1_atCF051385--4e-1At3g27580ATPK7O.I.H.G.S.X.
0.4352.80.97Zm.10375.1.S1_a_atBQ703821--2e-17At2g35360ubiquitin family proteinO.I.H.G.S.X.
0.3945.60.97Zm.17856.1.A1_atCF01574660S ribosomal protein L38-2e-24At3g5954060S ribosomal protein L38 (RPL38B)O.I.H.G.S.X.
0.3844.20.98Zm.4433.1.A1_atAY108076.1--4e-2At3g09850D111/G-patch domain-containing proteinO.I.H.G.S.X.
0.3641.30.98Zm.4006.1.A1_atBQ539204hypothetical protein LOC100216950-2e+0At4g22530embryo-abundant protein-relatedO.I.H.G.S.X.
0.2115.50.96Zm.17671.1.S1_atCK369711--3e+0At2g39510nodulin MtN21 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.098.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.098.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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