Co-expression analysis

Gene ID Zm.19007.1.A1_at
Gene name MADS-box protein AGL66
Homology with ArabidopsisSimilar to At1g77980: AGL66 (AGAMOUS-LIKE 66) (HF=1e-2)
Module size 27 genes
NF 0.41
%ile 46.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.98Zm.19007.1.A1_atCO528314MADS-box protein AGL66-1e-2At1g77980AGL66 (AGAMOUS-LIKE 66)O.I.H.G.S.X.
0.4961.90.98Zm.17931.1.A1_atCK827676hydrogen-transporting ATP synthase, rotational mechanism-5e+0At4g34265unknown proteinO.I.H.G.S.X.
0.4861.30.98Zm.6784.1.A1_atAI396307erwinia induced protein 2-8e-6At3g03160unknown proteinO.I.H.G.S.X.
0.4861.30.98Zm.5912.2.S1_a_atAI665330IDP277 protein-4e+0At1g08165unknown proteinO.I.H.G.S.X.
0.4759.90.98Zm.14344.1.A1_atCO529314subtilisin-like protease-2e-7At3g14067subtilase family proteinO.I.H.G.S.X.
0.4658.40.99Zm.12693.1.A1_atBU499844NADH-ubiquinone oxidoreductase 10.5 kDa subunit-2e-8At5g47890NADH-ubiquinone oxidoreductase B8 subunit, putativeO.I.H.G.S.X.
0.4658.40.99Zm.3937.1.S1_a_atBQ294219hypothetical protein LOC100276728-6e-4At4g25680unknown proteinO.I.H.G.S.X.
0.4455.70.99Zm.14413.1.A1_atCF052725hypothetical protein LOC100279243-1e-21At5g10270CDKCO.I.H.G.S.X.
0.4352.80.99Zm.14497.8.A1_s_atCO52746960S ribosomal protein L27 /// 60S ribosomal protein L27-2e-6At3g2223060S ribosomal protein L27 (RPL27B)O.I.H.G.S.X.
0.4352.80.99Zm.2142.1.A1_atCK369102hypothetical protein LOC100191429-1e-8At2g42880ATMPK20O.I.H.G.S.X.
0.4251.30.98Zm.16590.2.A1_x_atBQ703359--7e-5At1g14170KH domain-containing proteinO.I.H.G.S.X.
0.4149.70.98Zm.12750.1.S1_a_atCA402457--9e-16At4g39080VHA-A3 (VACUOLAR PROTON ATPASE A3)O.I.H.G.S.X.
0.4149.70.99Zm.4061.1.S1_atAI834355--3e+0At3g25030zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4048.50.99Zm.7126.2.S1_atAY110592.1--2e-9At3g51460RHD4 (ROOT HAIR DEFECTIVE4)O.I.H.G.S.X.
0.3945.60.99Zm.16527.1.A1_s_atCF637778hypothetical protein LOC100277800-5e-13At1g03260-O.I.H.G.S.X.
0.3945.60.99Zm.7048.1.A1_atAI677399hypothetical protein LOC100194145-6e-7At4g30996unknown proteinO.I.H.G.S.X.
0.3945.60.97Zm.6393.3.A1_atAI739811H1 histone-6e+0At4g33710pathogenesis-related protein, putativeO.I.H.G.S.X.
0.3844.20.98Zm.6154.2.S1_atCK347109hypothetical protein LOC100274324-7e+0At4g23880unknown proteinO.I.H.G.S.X.
0.3641.30.98Zm.7051.1.S1_atAI833408hypothetical protein LOC100277200-1e+0At5g61997unknown proteinO.I.H.G.S.X.
0.3538.90.97Zm.9111.2.A1_a_atBM266662flavoprotein wrbA-3e-1At4g27270quinone reductase family proteinO.I.H.G.S.X.
0.3437.20.99Zm.16527.1.A1_atCF637778hypothetical protein LOC100277800-5e-13At1g03260-O.I.H.G.S.X.
0.3336.00.99Zm.7049.1.A1_atAW331717huntingtin interacting protein K-4e-13At3g06610DNA-binding enhancer protein-relatedO.I.H.G.S.X.
0.3336.00.97Zm.9958.1.A1_atBM333322--6e-2At3g01320SNL1 (SIN3-LIKE 1)O.I.H.G.S.X.
0.3131.60.99Zm.16530.1.A1_atBM953023--3e-51At3g52590UBQ1 (UBIQUITIN EXTENSION PROTEIN 1)O.I.H.G.S.X.
0.3029.80.97Zm.6337.1.S1_a_atCD439345hypothetical protein LOC100273005 /// expp1 protein-3e-3At3g44150unknown proteinO.I.H.G.S.X.
0.2724.60.99Zm.221.1.A1_atU28376.1calcium-dependent protein kinase-4e-25At3g20410CPK9 (calmodulin-domain protein kinase 9)O.I.H.G.S.X.
0.2318.60.99Zm.12225.1.A1_atCA403034DIP1-2e+0At3g14340unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.499.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.398.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.198.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.698.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.598.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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