Co-expression analysis

Gene ID	Zm.18999.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At4g05070: unknown protein (HF=6e+0)
Module size	8 genes
NF	0.02
%ile	0.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.93	99.3	0.80	Zm.18999.1.A1_at	CO520868	-	-	6e+0	At4g05070	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.82	Zm.25.2.A1_a_at	AI795493	SOD2 protein	-	8e-1	At5g18100	CSD3 (copper/zinc superoxide dismutase 3)	O.I.	H.G.	S.X.	Please select
0.05	1.9	0.88	Zm.19071.1.S1_at	CO522362	chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa protein	-	2e-9	At3g55330	PPL1 (PsbP-like protein 1)	O.I.	H.G.	S.X.	Please select
0.02	0.7	0.89	Zm.10382.1.S1_at	BM953357	-	-	5e-12	At4g29660	EMB2752 (EMBRYO DEFECTIVE 2752)	O.I.	H.G.	S.X.	Please select
0.02	0.7	0.92	Zm.18248.1.A1_at	CN844167	solute carrier family 2, facilitated glucose transporter member 8	-	1e-1	At3g05160	sugar transporter, putative	O.I.	H.G.	S.X.	Please select
0.01	0.3	0.82	Zm.930.1.A1_at	BE129678	-	-	5e+0	At5g06080	LBD33 (LOB DOMAIN-CONTAINING PROTEIN 33)	O.I.	H.G.	S.X.	Please select
0.01	0.3	0.85	Zm.3430.1.A1_at	AY110455.1	-	-	7e+0	At5g02240	binding / catalytic/ coenzyme binding	O.I.	H.G.	S.X.	Please select
0.01	0.3	0.90	Zm.19088.1.A1_at	CO518225	hypothetical protein LOC100194181	-	1e+0	At1g10750	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
21.3	99.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.0	99.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.6	99.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.4	99.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.9	98.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.3	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.9	98.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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