Co-expression analysis

Gene ID Zm.1894.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g18800: NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family protein (HF=1e-4)
Module size 17 genes
NF 0.26
%ile 22.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.30.93Zm.1894.2.S1_atCK371174--1e-4At5g18800NADH-ubiquinone oxidoreductase 19 kDa subunit (NDUFA8) family proteinO.I.H.G.S.X.
0.5065.70.96Zm.4164.4.A1_a_atBM267227--3e+1At5g53180PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2)O.I.H.G.S.X.
0.3538.90.95Zm.3008.1.S1_atBM416985--2e-29At2g40810AtATG18cO.I.H.G.S.X.
0.3233.40.95Zm.19001.1.A1_atAY108422.1--3e-6At3g01540DRH1 (DEAD BOX RNA HELICASE 1)O.I.H.G.S.X.
0.2928.10.94Zm.15418.1.S1_atAY109016.1Hypothetical protein LOC100191383-4e+0At3g09900ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E)O.I.H.G.S.X.
0.2828.10.96Zm.564.1.S1_a_atAF244704.1glutathione S-transferase GST 39-3e-2At2g36640ATECP63 (EMBRYONIC CELL PROTEIN 63)O.I.H.G.S.X.
0.2521.30.96Zm.19167.1.A1_atAI629472hypothetical protein LOC100194096-1e-17At4g10000electron carrier/ protein disulfide oxidoreductaseO.I.H.G.S.X.
0.2521.30.96Zm.7847.1.A1_atBM080149--1e+0At3g27416unknown proteinO.I.H.G.S.X.
0.2521.30.97Zm.4467.1.S1_a_atAW054142hypothetical protein LOC100193777-1e-5At1g36280adenylosuccinate lyase, putative / adenylosuccinase, putativeO.I.H.G.S.X.
0.2419.80.96Zm.10105.1.A1_atBM379807--5e+0At4g11870unknown proteinO.I.H.G.S.X.
0.2419.80.96Zm.4338.1.A1_atCF638243peroxidase 72-1e-8At5g66390peroxidase 72 (PER72) (P72) (PRXR8)O.I.H.G.S.X.
0.2318.60.96Zm.8786.1.A1_atBM267294--2e+1At5g11070unknown proteinO.I.H.G.S.X.
0.2216.90.96Zm.17966.2.A1_a_atCK826966hypothetical protein LOC100273767-6e+0At2g37910cation/hydrogen exchanger, putative (CHX21)O.I.H.G.S.X.
0.1710.60.96Zm.11661.1.A1_atBM379776--1e+0At3g24570peroxisomal membrane 22 kDa family proteinO.I.H.G.S.X.
0.1710.60.96Zm.6329.1.A1_atAI834129--1e-1At5g24313unknown proteinO.I.H.G.S.X.
0.158.60.96Zm.4122.1.S1_atAY107878.1--2e+0At5g07490unknown proteinO.I.H.G.S.X.
0.083.40.95Zm.4603.1.S1_atCK827754--4e-3At1g75950SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.097.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.695.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
1.888.9GSM253279ZM_8d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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