Co-expression analysis

Gene ID Zm.18903.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g07400: forkhead-associated domain-containing protein / FHA domain-containing protein (HF=7e-2)
Module size 6 genes
NF 0.70
%ile 91.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.98Zm.18903.1.A1_atCO530915--7e-2At5g07400forkhead-associated domain-containing protein / FHA domain-containing proteinO.I.H.G.S.X.
0.7389.90.98Zm.4099.2.A1_s_atAI770849hypothetical protein LOC100191159-8e-1At2g38870protease inhibitor, putativeO.I.H.G.S.X.
0.6179.50.97Zm.12132.3.S1_a_atAI461523hypothetical protein LOC100192680-4e-50At5g03240UBQ3 (POLYUBIQUITIN 3)O.I.H.G.S.X.
0.6077.80.98Zm.18590.1.A1_atAW562614exostosin-like-1e+0At5g22930unknown proteinO.I.H.G.S.X.
0.6077.80.99ZmAffx.1097.1.S1_atAW120085--1e+1At5g25770unknown proteinO.I.H.G.S.X.
0.3641.30.98Zm.1546.3.A1_x_atCK369824--1e-6At1g15270-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.199.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.999.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.699.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os04g0403400, orthologous to the query gene, Zm.18903.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6483.4Os04g0403400At5g07400-Conserved hypothetical protein3e-5At5g07400forkhead-associated domain-containing protein / FHA domain-containing proteinO.I.H.G.S.X.
0.6382.7Os02g0315600At5g07400-Basic helix-loop-helix dimerisation region bHLHdomain containing protein1e+0At5g63595FLS4 (FLAVONOL SYNTHASE 4)O.I.H.G.S.X.
0.4051.1Os01g0174700At5g07400-Protein kinase (Fragment)7e-11At3g12690AGC1.5 (AGC KINASE 1.5)O.I.H.G.S.X.
0.3541.7Os01g0974500At5g07400--2e-1At3g09410pectinacetylesterase family proteinO.I.H.G.S.X.
0.3134.5Os01g0838900At5g07400-Trp repressor/replication initiator domaincontaining protein7e-4At4g08520clathrin adaptor complex small chain family proteinO.I.H.G.S.X.
0.2931.1Os01g0909200At5g07400-Type III restriction enzyme, res subunit familyprotein2e-1At3g43920ribonuclease III family proteinO.I.H.G.S.X.
0.2931.1Os07g0225100At5g07400-Aromatic amino acid permease family protein3e-6At2g33260tryptophan/tyrosine permease family proteinO.I.H.G.S.X.
0.2831.1Os04g0673400At5g07400-Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)3e-9At3g18630uracil DNA glycosylase family proteinO.I.H.G.S.X.
0.2727.5Os03g0213200At5g07400-Hypothetical protein6e+0At5g59910HTB4O.I.H.G.S.X.
0.2117.9Os03g0381100At5g07400-ab initio prediction with EST support2e-4At1g34150tRNA pseudouridine synthase family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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