Co-expression analysis

Gene ID	Zm.18726.1.A1_at
Gene name	hypothetical protein LOC100272741
Homology with Arabidopsis	Similar to At4g38060: unknown protein (HF=1e+0)
Module size	14 genes
NF	0.46
%ile	56.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	77.8	0.96	Zm.18726.1.A1_at	BM075022	hypothetical protein LOC100272741	-	1e+0	At4g38060	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.97	Zm.2390.1.S1_at	CF628678	hypothetical protein LOC100276791	-	1e-1	At5g09850	transcription elongation factor-related	O.I.	H.G.	S.X.	Please select
0.56	74.4	0.97	Zm.4891.1.S1_at	BF729097	-	-	5e-1	At3g14850	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.8233.1.A1_at	AI947630	-	-	1e-2	At4g31580	SRZ-22	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.97	Zm.4385.1.S1_at	BQ487047	small nuclear ribonucleoprotein-associated protein B	-	3e-15	At5g44500	small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative	O.I.	H.G.	S.X.	Please select
0.45	56.4	0.97	Zm.4764.1.S1_at	AI739879	vacuolar protein sorting 37C	-	2e-3	At2g36680	-	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.97	Zm.17770.1.S1_at	CK371626	hypothetical protein LOC100274091	-	4e+0	At5g54145	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.97	Zm.16805.3.S1_at	BM381902	basic endochitinase C	-	2e-10	At3g12500	ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.97	Zm.12037.1.S1_at	BI894209	bHLH transcription factor PTF1	-	4e-2	At4g30980	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.37	42.3	0.98	Zm.3633.2.S1_x_at	CF634876	APx1 - Cytosolic Ascorbate Peroxidase	-	3e-28	At1g07890	APX1 (ascorbate peroxidase 1)	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.98	Zm.9984.1.A1_at	CO529085	Hypothetical protein LOC100217031	-	4e-4	At1g65000	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.98	Zm.9989.1.A1_at	BM332236	DNA binding protein	-	5e+0	At5g03090	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.97	Zm.1773.1.S1_at	CO524227	hypothetical protein LOC100193052 /// hypothetical protein LOC100273661 /// hypothetical protein LOC100274588	-	6e-4	At5g06370	NC domain-containing protein	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.98	Zm.6964.1.S1_at	AI665995	-	-	6e-2	At4g22320	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.8	97.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.2	96.0	GSM206304	Upper pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.9	95.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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