Co-expression analysis

Gene ID	Zm.186.1.S1_at
Gene name	Bowman-Birk type wound-induced proteinase inhibitor WIP1
Homology with Arabidopsis	Similar to At1g20000: TAF11b (TBP-ASSOCIATED FACTOR 11b) (HF=1e+0)
Module size	6 genes
NF	0.58
%ile	78.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	95.6	0.96	Zm.186.1.S1_at	X71396.1	Bowman-Birk type wound-induced proteinase inhibitor WIP1	-	1e+0	At1g20000	TAF11b (TBP-ASSOCIATED FACTOR 11b)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.2780.1.A1_at	CF057723	hypothetical protein LOC100278371	-	4e-1	At1g14270	CAAX amino terminal protease family protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.2713.2.A1_at	AI881541	-	-	1e-30	At5g60790	ATGCN1	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.98	Zm.14354.1.S1_x_at	CK370303	40S ribosomal protein S29 /// 40S ribosomal protein S29	-	2e-11	At4g33865	40S ribosomal protein S29 (RPS29C)	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.97	Zm.6131.1.S1_at	AY105213.1	hypothetical protein LOC100191528	-	7e-1	At1g74560	NRP1 (NAP1-RELATED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.98	Zm.5196.1.A1_at	BM334572	PHD-finger family protein	-	1e+0	At2g24430	ANAC038 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 38)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.7	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
7.2	97.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.6	97.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.5	97.1	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.1	96.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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