Co-expression analysis

Gene ID Zm.18508.1.S1_at
Gene name uclacyanin-2
Homology with ArabidopsisSimilar to At1g25300: octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (HF=5e-1)
Module size 6 genes
NF 0.35
%ile 35.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.97Zm.18508.1.S1_atCO521114uclacyanin-2-5e-1At1g25300octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinO.I.H.G.S.X.
0.5571.60.97Zm.274.2.S1_atCD988484--6e-14At1g80950phospholipid/glycerol acyltransferase family proteinO.I.H.G.S.X.
0.3538.90.97Zm.16892.3.S1_x_atCB281906calmodulin binding protein-5e-3At3g22190IQD5 (IQ-domain 5)O.I.H.G.S.X.
0.3336.00.98Zm.11605.1.A1_atBM379262--4e+0At4g11930unknown proteinO.I.H.G.S.X.
0.3131.60.98Zm.3699.5.A1_atAY107222.1--3e-2At5g09995unknown proteinO.I.H.G.S.X.
0.158.60.97Zm.6475.2.A1_a_atCO531953hypothetical protein LOC100273857 /// PHD finger protein-3e-21At1g14510AL7 (ALFIN-LIKE 7)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.098.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM290554WS2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.107673.1.S1_at, orthologous to the query gene, Zm.18508.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5576.8TaAffx.107673.1.S1_atAt1g25300--3e-1At1g51090heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.5273.7TaAffx.113091.1.S1_atAt1g25300--4e+0At2g20740-O.I.H.G.S.X.
0.4869.0TaAffx.628.1.A1_x_atAt1g25300--4e+0At5g15290integral membrane family proteinO.I.H.G.S.X.
0.4565.2TaAffx.113164.1.S1_atAt1g25300--2e-4At5g61840GUT1O.I.H.G.S.X.
0.4362.2Ta.7126.3.S1_atAt1g25300--5e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeO.I.H.G.S.X.
0.4159.6TaAffx.24835.1.S1_atAt1g25300--3e+0At5g45573unknown proteinO.I.H.G.S.X.
0.4058.4TaAffx.78933.1.S1_atAt1g25300--1e+1At5g42330unknown proteinO.I.H.G.S.X.
0.3854.7Ta.30816.2.S1_atAt1g25300--2e-1At1g49010myb family transcription factorO.I.H.G.S.X.
0.3549.8TaAffx.9352.1.S1_atAt1g25300--2e-1At4g32570TIFY8 (TIFY DOMAIN PROTEIN 8)O.I.H.G.S.X.
0.3142.7Ta.3840.2.S1_atAt1g25300--2e-5At5g211705'-AMP-activated protein kinase beta-2 subunit, putativeO.I.H.G.S.X.
0.3040.9TaAffx.113024.1.S1_s_atAt1g25300--2e+1At3g27270-O.I.H.G.S.X.
0.2839.2Ta.17745.1.S1_atAt1g25300--2e+1At5g65480unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera



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