Co-expression analysis

Gene ID Zm.18480.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g08460: HDA08 (HF=1e-5)
Module size 8 genes
NF 0.55
%ile 72.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.10.94Zm.18480.1.S1_atCO532822--1e-5At1g08460HDA08O.I.H.G.S.X.
0.6785.80.95Zm.8331.1.A1_atBM349811--9e-3At1g72430auxin-responsive protein-relatedO.I.H.G.S.X.
0.6481.70.94Zm.12244.2.A1_atAW267221--9e-1At5g46940invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.6381.10.95Zm.2037.1.S1_a_atCD219439--2e-1At2g39855unknown proteinO.I.H.G.S.X.
0.6179.50.93Zm.4841.1.S1_atBQ527900hypothetical protein LOC100193482-7e-23At3g48730GSA2 (glutamate-1-semialdehyde 2,1-aminomutase 2)O.I.H.G.S.X.
0.5976.10.95Zm.5761.1.A1_atAI649473--7e-22At5g28850calcium-binding EF hand family proteinO.I.H.G.S.X.
0.4251.30.95Zm.3081.1.A1_x_atCD438917heat shock protein1-0At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.2216.90.94Zm.10189.3.A1_atAI881633--3e-37At4g13940MEE58 (MATERNAL EFFECT EMBRYO ARREST 58)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.998.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
5.997.3GSM162265Wild type 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
5.597.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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