Co-expression analysis

Gene ID Zm.18395.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g04150: BHLH101 (HF=9e+0)
Module size 10 genes
NF 0.59
%ile 78.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5875.10.98Zm.18395.1.S1_atCO527972--9e+0At5g04150BHLH101O.I.H.G.S.X.
0.8294.60.99Zm.3025.1.S1_atAW288746--1e+1At5g11500unknown proteinO.I.H.G.S.X.
0.7892.50.99ZmAffx.280.1.S1_atAI670408--3e+1Atcg00070-O.I.H.G.S.X.
0.7389.90.99ZmAffx.1090.1.A1_atAW065404--1e+1At3g57958unknown proteinO.I.H.G.S.X.
0.7087.00.99Zm.17378.3.A1_atBM078177--3e-1At5g58640selenoprotein-relatedO.I.H.G.S.X.
0.6785.80.99Zm.4224.1.A1_atCF019878COX VIIa-like protein-5e+0At3g55680invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.6077.80.99Zm.8702.1.A1_atAI734669--5e-19At1g04140transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.5065.70.99ZmAffx.281.1.A1_atAI670409--3e+0At5g46795MSP2 (microspore-specific promoter 2)O.I.H.G.S.X.
0.3641.30.99Zm.4156.1.A1_atBG840200--7e+0At5g03380heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.3131.60.99Zm.5791.2.A1_atAW438331--2e-2At4g23570SGT1AO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.398.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.492.2GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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