| Gene ID | Zm.18388.1.A1_at |
| Gene name | hypothetical protein LOC100273514 |
| Homology with Arabidopsis | Similar to At3g46620: zinc finger (C3HC4-type RING finger) family protein (HF=1e-1) |
| Module size | 6 genes |
| NF | 0.56 |
| %ile | 74.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.97 | Zm.18388.1.A1_at | CB604567 | hypothetical protein LOC100273514 | - | 1e-1 | At3g46620 | zinc finger (C3HC4-type RING finger) family protein | O.I. | H.G. | S.X. | |
| 0.77 | 92.1 | 0.96 | Zm.828.1.A1_at | AI734461 | hypothetical protein LOC100277560 | - | 5e+0 | At3g21371 | unknown protein | O.I. | H.G. | S.X. | |
| 0.57 | 75.1 | 0.97 | Zm.12968.1.S1_at | CO528187 | pyruvate dehydrogenase E1 component subunit beta | - | 3e-62 | At1g30120 | PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA) | O.I. | H.G. | S.X. | |
| 0.44 | 55.7 | 0.97 | Zm.5917.1.A1_a_at | BM337345 | hypothetical protein LOC100192679 | - | 2e+0 | At1g27970 | NTF2B (NUCLEAR TRANSPORT FACTOR 2B) | O.I. | H.G. | S.X. | |
| 0.39 | 45.6 | 0.97 | Zm.16482.2.A1_at | BM337760 | - | - | 9e-19 | At3g09630 | 60S ribosomal protein L4/L1 (RPL4A) | O.I. | H.G. | S.X. | |
| 0.33 | 36.0 | 0.97 | Zm.5595.1.A1_at | CD442436 | hypothetical protein LOC100278654 | - | 3e-34 | At2g29080 | ftsh3 (FtsH protease 3) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 13.8 | 98.8 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 13.1 | 98.7 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.5 | 98.6 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.8 | 98.5 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.4 | 98.4 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.8 | 98.3 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.1 | 98.2 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.0 | 98.2 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.6 | 97.9 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.7 | 93.2 | GSM205373 | Mo17 13 DAP endosperm tissue biological replicate 3 | GSE8275 | Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.50 | 66.9 | Contig23383_at | At3g46620 | - | - | 7e-6 | At1g06850 | AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52) | O.I. | H.G. | S.X. | |
| 0.36 | 47.1 | Contig610_at | At3g46620 | - | - | 1e-1 | At3g01500 | CA1 (CARBONIC ANHYDRASE 1) | O.I. | H.G. | S.X. | |
| 0.15 | 14.1 | Contig20647_at | At3g46620 | - | - | 2e+1 | At5g03995 | unknown protein | O.I. | H.G. | S.X. | |
| 0.15 | 14.1 | Contig4451_s_at | At3g46620 | - | - | 4e-68 | At4g32410 | CESA1 (CELLULOSE SYNTHASE 1) | O.I. | H.G. | S.X. | |
| 0.08 | 6.5 | Contig22514_at | At3g46620 | - | - | 8e-2 | At5g59290 | UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3) | O.I. | H.G. | S.X. | |
| 0.07 | 5.8 | Contig25688_at | At3g46620 | - | - | 5e+0 | At3g01210 | nucleic acid binding / oxidoreductase | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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