Co-expression analysis

Gene ID Zm.18353.1.A1_at
Gene name hypothetical protein LOC100280196
Homology with ArabidopsisSimilar to At1g16640: transcriptional factor B3 family protein (HF=2e+0)
Module size 36 genes
NF 0.42
%ile 49.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.30.96Zm.18353.1.A1_atAY111403.1hypothetical protein LOC100280196-2e+0At1g16640transcriptional factor B3 family proteinO.I.H.G.S.X.
0.6179.50.97Zm.12377.1.S1_atBQ577907--1e+1At3g10915reticulon family proteinO.I.H.G.S.X.
0.6179.50.97Zm.8138.1.A1_atBM336608tubby protein-1e-3At1g25280AtTLP10 (TUBBY LIKE PROTEIN 10)O.I.H.G.S.X.
0.5875.10.97Zm.5180.1.A1_atAI612313--1e+1At5g27090AGL54O.I.H.G.S.X.
0.5875.10.97Zm.12433.1.S1_atAY105016.1tyrosyl-tRNA synthetase-4e-18At2g33840tRNA synthetase class I (W and Y) family proteinO.I.H.G.S.X.
0.5469.80.96Zm.4883.1.S1_atAI782987hypothetical protein LOC100216906-4e-3At2g37650scarecrow-like transcription factor 9 (SCL9)O.I.H.G.S.X.
0.5267.30.97Zm.12674.1.A1_atCN845329--5e-5At1g34350unknown proteinO.I.H.G.S.X.
0.5267.30.97Zm.13648.1.S1_atAY107241.1caleosin related protein-2e+0At1g70670caleosin-related family proteinO.I.H.G.S.X.
0.5166.40.96Zm.17460.1.S1_atCK327598--3e+0At1g51970unknown proteinO.I.H.G.S.X.
0.5065.70.96ZmAffx.794.1.S1_atAI770336--8e-1At3g21890zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.4961.90.98Zm.18374.1.A1_atCO521737hypothetical protein LOC100191144-1e-1At1g21890nodulin MtN21 family proteinO.I.H.G.S.X.
0.4861.30.97Zm.7644.2.S1_atBM341428--4e+0At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.4658.40.97Zm.494.2.S1_atBE056113Prohibitin1-3e+0At5g17510unknown proteinO.I.H.G.S.X.
0.4658.40.96Zm.851.1.S1_atCF007204hypothetical protein LOC100275940-3e-8At1g10590DNA-binding protein-relatedO.I.H.G.S.X.
0.4556.40.97Zm.8176.1.A1_atAY107848.1hypothetical protein LOC100280367-4e+0At4g04423endo-1,3(4)-beta-glucanaseO.I.H.G.S.X.
0.4352.80.97Zm.18133.1.A1_atAY103981.1--8e-38At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)O.I.H.G.S.X.
0.4251.30.97Zm.4762.1.A1_atBG874087--2e-6At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)O.I.H.G.S.X.
0.4251.30.97Zm.13417.1.A1_atCA400681hypothetical protein LOC100193979-4e-1At3g05830-O.I.H.G.S.X.
0.4149.70.96Zm.5093.1.A1_atAI600800GAGA-binding protein-4e-4At1g14685BPC2 (BASIC PENTACYSTEINE 2)O.I.H.G.S.X.
0.3945.60.97Zm.14833.1.A1_atCF629020--7e+0At5g10430AGP4 (ARABINOGALACTAN PROTEIN 4)O.I.H.G.S.X.
0.3844.20.97Zm.7620.1.A1_atCF629426hypothetical protein LOC100279978-2e-3At2g24010scpl23 (serine carboxypeptidase-like 23)O.I.H.G.S.X.
0.3844.20.97Zm.10825.1.A1_atCF629429O-methyltransferase BX7-8e-1At3g13594unknown proteinO.I.H.G.S.X.
0.3844.20.97Zm.12433.1.S1_s_atAY105016.1tyrosyl-tRNA synthetase-4e-18At2g33840tRNA synthetase class I (W and Y) family proteinO.I.H.G.S.X.
0.3844.20.97Zm.18873.1.S1_atAY103904.1programmed cell death protein 2-2e-3At4g02220zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing proteinO.I.H.G.S.X.
0.3742.30.97Zm.7941.1.A1_atBM080529--1e+0At3g50040unknown proteinO.I.H.G.S.X.
0.3742.30.97Zm.18278.1.S1_atCK371368--1e-26At3g52200LTA3O.I.H.G.S.X.
0.3641.30.96Zm.18436.1.A1_atCO521866--6e-1At4g19003VPS25O.I.H.G.S.X.
0.3336.00.97Zm.16475.3.S1_atCF019135--2e-7At2g30260U2B'' (U2 small nuclear ribonucleoprotein B)O.I.H.G.S.X.
0.3336.00.97Zm.18125.1.S1_atCN844337--4e-1At3g47380invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.3336.00.97Zm.2016.1.S1_atAW566149zinc finger, C3HC4 type family protein-2e+0At5g51195unknown proteinO.I.H.G.S.X.
0.3336.00.97Zm.18045.1.A1_atBM080270--8e-4At1g22180SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.
0.3233.40.97Zm.12736.2.A1_atAI881252--5e+0At4g25720QC (GLUTAMINYL CYCLASE)O.I.H.G.S.X.
0.3233.40.97Zm.2861.1.A1_atAW076444retinoblastoma-binding protein-like-1e+0At1g14310haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.3131.60.97Zm.4271.4.A1_atBG316519hypothetical protein LOC100273684-6e-5At1g02690IMPA-6 (IMPORTIN ALPHA ISOFORM 6)O.I.H.G.S.X.
0.2622.70.97Zm.17724.1.S1_a_atCF623515hypothetical protein LOC100278419-1e+0At3g56240CCH (COPPER CHAPERONE)O.I.H.G.S.X.
0.2318.60.96Zm.15975.1.A1_atAY109347.1--5e-2At4g17560ribosomal protein L19 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.698.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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