Co-expression analysis

Gene ID	Zm.18312.1.S1_at
Gene name	hypothetical protein LOC100279515
Homology with Arabidopsis	Similar to At3g13510: unknown protein (HF=7e-17)
Module size	6 genes
NF	0.24
%ile	18.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.99	Zm.18312.1.S1_at	CK827776	hypothetical protein LOC100279515	-	7e-17	At3g13510	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.99	ZmAffx.1345.1.S1_s_at	40794996-40	-	-	9e-41	Atmg01330	-	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.99	ZmAffx.1436.1.S1_at	11990232-2	-	-	2e-29	Atcg00040	-	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.99	Zm.18313.1.A1_at	CO532950	hypothetical protein LOC100193523	-	8e-11	At5g42990	UBC18 (ubiquitin-conjugating enzyme 18)	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.99	ZmAffx.1341.1.S1_at	11990232-89	-	-	2e-119	Atcg01090	-	O.I.	H.G.	S.X.	Please select
0.10	4.6	0.99	ZmAffx.1342.1.S1_at	40794996-150	-	-	9e-31	Atmg00620	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.8	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.7	98.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM202304	B73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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