Co-expression analysis

Gene ID Zm.18267.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g59845: gibberellin-regulated family protein (HF=2e+0)
Module size 13 genes
NF 0.51
%ile 65.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5267.30.97Zm.18267.1.A1_atAY222838.1--2e+0At5g59845gibberellin-regulated family proteinO.I.H.G.S.X.
0.7792.10.98Zm.6096.1.A1_atCF636033hypothetical protein LOC100273833-6e-1At4g39170SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeO.I.H.G.S.X.
0.6785.80.98Zm.4813.1.S1_atCD977978--5e-1At1g35537-O.I.H.G.S.X.
0.5369.10.97Zm.15694.1.A1_atCD441036--6e-3At4g22600unknown proteinO.I.H.G.S.X.
0.5267.30.98Zm.14497.9.S1_atBM382119--2e-15At5g59910HTB4O.I.H.G.S.X.
0.5166.40.98Zm.2806.1.A1_a_atAW067337--6e-1At2g41660MIZ1 (mizu-kussei 1)O.I.H.G.S.X.
0.5065.70.97Zm.5106.1.A1_atAI600864hypothetical protein LOC100273412-1e-20At4g22330ATCES1O.I.H.G.S.X.
0.5065.70.98Zm.18033.1.A1_atBM080835--1e+0At1g11240unknown proteinO.I.H.G.S.X.
0.4861.30.98Zm.13351.2.A1_atAY110216.1Protein kinase-2e-13At5g55910D6PK (D6 PROTEIN KINASE)O.I.H.G.S.X.
0.4861.30.98Zm.6200.2.S1_a_atAI714601Hypothetical protein LOC100191329-3e-3At5g19510elongation factor 1B alpha-subunit 2 (eEF1Balpha2)O.I.H.G.S.X.
0.4455.70.98Zm.796.1.A1_a_atCK370719--3e-9At5g53140protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.3641.30.98Zm.384.1.A1_atAF001635.1physical impedance induced protein2-6e+0At5g03100F-box family proteinO.I.H.G.S.X.
0.3336.00.98Zm.5305.1.A1_atCK370425ribonucleoprotein A-6e-4At2g3722029 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.899.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
23.699.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
22.999.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.799.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.799.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.599.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.999.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.999.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.199.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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