Co-expression analysis

Gene ID Zm.1826.1.A1_at
Gene name nitrate reductase
Homology with ArabidopsisSimilar to At1g37130: NIA2 (NITRATE REDUCTASE 2) (HF=8e-21)
Module size 6 genes
NF 0.03
%ile 1.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.10.85Zm.1826.1.A1_atAW461127nitrate reductase-8e-21At1g37130NIA2 (NITRATE REDUCTASE 2)O.I.H.G.S.X.
0.5065.70.91Zm.4.2.A1_atCA401225--2e-3At5g11860NLI interacting factor (NIF) family proteinO.I.H.G.S.X.
0.136.80.87Zm.5436.1.A1_atAI833498--3e+0At3g06470GNS1/SUR4 membrane family proteinO.I.H.G.S.X.
0.041.50.87Zm.10115.1.S1_x_atCF626396early response to dehydration 15-like protein-2e+0At1g62240unknown proteinO.I.H.G.S.X.
0.020.70.89ZmAffx.1083.1.S1_atAI974922--1e+0At1g59830PP2A-1O.I.H.G.S.X.
0.010.30.90Zm.3982.1.A1_atAW14668450S ribosomal protein L21-2e-3At1g3568050S ribosomal protein L21, chloroplast / CL21 (RPL21)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.998.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.598.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig8716_at, orthologous to the query gene, Zm.1826.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7790.8Contig8716_atAt1g37130--3e-5At1g37130NIA2 (NITRATE REDUCTASE 2)O.I.H.G.S.X.
0.3545.1Contig10301_atAt1g37130--1e-1At1g02710glycine-rich proteinO.I.H.G.S.X.
0.2935.5Contig10669_atAt1g37130--4e-9At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)O.I.H.G.S.X.
0.1210.4Contig12238_atAt1g37130--5e-5At5g48160OBE2 (OBERON2)O.I.H.G.S.X.
0.097.4Contig8713_atAt1g37130--8e-5At2g45270glycoprotease M22 family proteinO.I.H.G.S.X.
0.054.1rbah36l17_s_atAt1g37130--7e-30At1g30580GTP bindingO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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