Co-expression analysis

Gene ID Zm.18230.1.S1_at
Gene name hypothetical protein LOC100278474
Homology with ArabidopsisSimilar to At4g18510: CLE2 (CLAVATA3/ESR-RELATED) (HF=2e+0)
Module size 6 genes
NF 0.24
%ile 19.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4759.90.96Zm.18230.1.S1_atCN844227hypothetical protein LOC100278474-2e+0At4g18510CLE2 (CLAVATA3/ESR-RELATED)O.I.H.G.S.X.
0.5775.10.96Zm.6145.1.A1_atCA828167hypothetical protein LOC100192814-5e+0At5g27210-O.I.H.G.S.X.
0.3844.20.97Zm.15995.2.A1_atAW289130peptidyl-prolyl cis-trans isomerase CYP19-4-1e-18At5g58710ROC7O.I.H.G.S.X.
0.2521.30.96Zm.2630.1.A1_atAW066591--3e+0At5g48545histidine triad family protein / HIT family proteinO.I.H.G.S.X.
0.2318.60.96Zm.961.1.A1_atCA400684LAP4 protein-2e+0At2g02370-O.I.H.G.S.X.
0.115.30.96Zm.1417.3.A1_a_atCF010509--8e-2At4g34960peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.898.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.190.8GSM205369Mo17 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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