Co-expression analysis

Gene ID Zm.18228.1.S1_at
Gene name hypothetical protein LOC100275982
Homology with ArabidopsisSimilar to At2g34690: ACD11 (ACCELERATED CELL DEATH 11) (HF=5e-10)
Module size 10 genes
NF 0.61
%ile 81.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.97Zm.18228.1.S1_atAY107769.1hypothetical protein LOC100275982-5e-10At2g34690ACD11 (ACCELERATED CELL DEATH 11)O.I.H.G.S.X.
0.7087.00.98Zm.19306.1.A1_atAI664819hypothetical protein LOC100193355-6e-1At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.H.G.S.X.
0.6785.80.97Zm.13021.1.A1_atCK787287--4e-1At4g15885kinesin motor protein-relatedO.I.H.G.S.X.
0.6381.10.98Zm.810.1.S1_atCF006379--6e-69At5g45550mob1/phocein family proteinO.I.H.G.S.X.
0.5674.40.97Zm.17990.1.S1_atBG837629hypothetical protein LOC100275286-2e+0At5g54460wound-responsive protein-relatedO.I.H.G.S.X.
0.5674.40.97Zm.3808.1.S1_atCF010880low-molecular-weight cysteine-rich protein LCR68-5e+0At4g02850phenazine biosynthesis PhzC/PhzF family proteinO.I.H.G.S.X.
0.5674.40.98Zm.13427.1.S1_atAF124738.1hypothetical protein LOC100194389-1e-7At4g21520transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.5369.10.98Zm.2330.1.S1_atBE552610--4e-15At2g42120POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT)O.I.H.G.S.X.
0.5369.10.97Zm.4164.1.A1_x_atBM079246--5e+0At3g01860unknown proteinO.I.H.G.S.X.
0.4352.80.97ZmAffx.563.1.S1_atAI714606--3e+0At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM206324Upper pulvinus 2 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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