Co-expression analysis

Gene ID	Zm.18097.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g72230: plastocyanin-like domain-containing protein (HF=8e-2)
Module size	6 genes
NF	0.23
%ile	17.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	71.6	0.93	Zm.18097.1.A1_at	CF635499	-	-	8e-2	At1g72230	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.94	Zm.17324.1.A1_at	CK347236	lanC-like protein 2	-	9e-7	At1g52920	GPCR (G PROTEIN COUPLED RECEPTOR)	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.94	Zm.2443.1.A1_at	CF632996	hypothetical protein LOC100272920	-	3e+0	At4g19645	-	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.95	Zm.5652.1.A1_at	AI629811	CCT motif family protein	-	7e-2	At3g07650	COL9 (CONSTANS-LIKE 9)	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.94	Zm.8052.2.A1_at	BM348133	-	-	1e-1	At1g15950	CCR1 (CINNAMOYL COA REDUCTASE 1)	O.I.	H.G.	S.X.	Please select
0.16	9.4	0.95	Zm.331.1.S1_at	CD964619	ae1 protein	-	1e+0	At1g67865	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.5	98.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.0	98.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.0	98.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.9	98.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.2	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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