Co-expression analysis

Gene ID Zm.18090.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g15880: GOS11 (golgi snare 11) (HF=1e-8)
Module size 18 genes
NF 0.44
%ile 52.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.20.99Zm.18090.1.A1_atAY106351.1--1e-8At1g15880GOS11 (golgi snare 11)O.I.H.G.S.X.
0.6886.10.99Zm.1968.1.A1_atCF244101MGD2-1e-20At2g11810MGDCO.I.H.G.S.X.
0.6785.80.99Zm.11475.1.A1_a_atBQ539206hypothetical protein LOC100273223-1e-3At2g45330emb1067 (embryo defective 1067)O.I.H.G.S.X.
0.6179.50.99Zm.7304.1.A1_x_atBM350347hypothetical protein LOC100275336-3e-1At1g31335unknown proteinO.I.H.G.S.X.
0.5674.40.99ZmAffx.780.1.S1_atAI746266--8e-1At1g08350endomembrane protein 70 family proteinO.I.H.G.S.X.
0.4658.40.99Zm.4402.1.A1_atAW091394hypothetical protein LOC100193028-1e-3At5g21160La domain-containing protein / proline-rich family proteinO.I.H.G.S.X.
0.4455.71.00Zm.9517.1.A1_atBM269495--2e+1Atmg00630-O.I.H.G.S.X.
0.4251.30.99ZmAffx.113.1.A1_atAI665585Hypothetical protein LOC100193950-3e+0At5g639903'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putativeO.I.H.G.S.X.
0.4149.71.00Zm.2146.1.A1_atAW287813--5e+0At5g35475-O.I.H.G.S.X.
0.4048.51.00Zm.13289.1.S1_atCA826954--7e-2At1g22210trehalose-6-phosphate phosphatase, putativeO.I.H.G.S.X.
0.3844.21.00Zm.2684.1.A1_atAW066853--3e+0At1g49510emb1273 (embryo defective 1273)O.I.H.G.S.X.
0.3742.31.00ZmAffx.1036.1.A1_atAI881726--1e-1At2g43795unknown proteinO.I.H.G.S.X.
0.3437.20.99Zm.17248.3.A1_x_atAW057073hypothetical protein LOC100280404-7e-11At5g37510EMB1467 (embryo defective 1467)O.I.H.G.S.X.
0.3233.40.99Zm.12739.1.S1_atBG835843SR repressor protein-2e-1At3g55460SCL30O.I.H.G.S.X.
0.3131.60.99ZmAffx.543.1.S1_atAI712085--3e+0At4g03510RMA1O.I.H.G.S.X.
0.3131.61.00ZmAffx.104.1.A1_atAI665536hypothetical protein LOC100273079-8e-1At2g34980SETH1O.I.H.G.S.X.
0.2928.11.00Zm.12405.1.A1_atBM381554alpha/beta hydrolase fold-2e+0At1g64340unknown proteinO.I.H.G.S.X.
0.2828.10.99Zm.10487.1.S1_atCF009695desiccation-associated protein-1e-1At1g12665-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.599.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.399.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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