Co-expression analysis

Gene ID Zm.18085.1.S1_at
Gene name hypothetical protein LOC100274126
Homology with ArabidopsisSimilar to At5g13800: hydrolase, alpha/beta fold family protein (HF=5e-11)
Module size 6 genes
NF 0.47
%ile 58.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.97Zm.18085.1.S1_atCK986038hypothetical protein LOC100274126-5e-11At5g13800hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.6179.50.97Zm.9649.1.A1_atBM337167hypothetical protein LOC100277264-1e+0At1g43720unknown proteinO.I.H.G.S.X.
0.5775.10.97Zm.18460.1.S1_atCO521354hypothetical protein LOC100216873-8e-3At1g60430ARPC3 (actin-related protein C3)O.I.H.G.S.X.
0.3538.90.97Zm.2234.3.A1_a_atCO526105hypothetical protein LOC100273895-9e-9At4g17180glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.3437.20.96Zm.13855.1.A1_atAF439731.1glycine cleavage complex T-protein-7e-47At1g11860aminomethyltransferase, putativeO.I.H.G.S.X.
0.2521.30.96ZmAffx.1198.1.S1_atBE056195--2e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4658.40.95Zm.1915.1.S1_atCF972562hypothetical protein LOC100276388-4e-1At4g28180unknown proteinO.I.H.G.S.X.
0.4455.70.93Zm.983.1.S1_a_atCK144594hypothetical protein LOC100194356 /// transcription factor BTF3-7e-28At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.4251.30.94Zm.7116.1.A1_atBI142341beta-expansin 4-7e-1At1g65680ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2)O.I.H.G.S.X.
0.4048.50.96Zm.18189.1.S1_atCN844773hypothetical protein LOC100278018-6e+0At1g51402unknown proteinO.I.H.G.S.X.
0.4048.50.97Zm.13712.1.S1_atAY106534.1--4e+0At2g46640unknown proteinO.I.H.G.S.X.
0.3641.30.95Zm.9116.1.A1_atBM266686hsp20/alpha crystallin family protein-6e-1At3g60020ASK5 (ARABIDOPSIS SKP1-LIKE 5)O.I.H.G.S.X.
0.3233.40.90Zm.9453.1.A1_atCO521132hypothetical protein LOC100193324 /// hypothetical protein LOC100278577-7e-1At4g28100unknown proteinO.I.H.G.S.X.
0.3233.40.95Zm.11822.1.A1_atBM381027hypothetical protein LOC100217292-2e+1At5g62030diphthamide synthesis DPH2 family proteinO.I.H.G.S.X.
0.3131.60.93Zm.5414.1.A1_atBQ53956530S ribosomal protein S1-7e-69At5g30510RPS1 (RIBOSOMAL PROTEIN S1)O.I.H.G.S.X.
0.3131.60.96Zm.3529.1.A1_a_atCO528072hypothetical protein LOC100193299 /// hypothetical protein LOC100273402-2e+0At3g11150unknown proteinO.I.H.G.S.X.
0.3131.60.96Zm.14784.1.S1_atAI795527--3e+0At3g01175-O.I.H.G.S.X.
0.3131.60.97Zm.2894.1.S1_atAY104773.1hypothetical protein LOC100191986-2e-20At5g66880SNRK2.3 (SUCROSE NONFERMENTING 1(SNF1)-RELATED PROTEIN KINASE 2.3)O.I.H.G.S.X.
0.2928.10.95Zm.899.1.A1_atCK370176esterase-6e-7At1g29840esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.2928.10.97Zm.18081.1.S1_atBM268388chorismate synthase 2-1e-7At1g48850EMB1144 (embryo defective 1144)O.I.H.G.S.X.
0.2828.10.91Zm.822.1.S1_atCO526761meiosis 5-2e+0At5g60490FLA12O.I.H.G.S.X.
0.2622.70.93Zm.9650.1.S1_atBM380250GATA transcription factor 22-2e+0At1g62225unknown proteinO.I.H.G.S.X.
0.2622.70.94Zm.8812.1.A1_atBM348823hypothetical protein LOC100274414-2e-7At1g16560Per1-like family proteinO.I.H.G.S.X.
0.2521.30.94Zm.16749.1.A1_atCF648074inhibitor of apoptosis-like protein-6e+0At3g63410APG1 (ALBINO OR PALE GREEN MUTANT 1)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.498.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
5.196.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO
4.396.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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