Co-expression analysis

Gene ID Zm.18083.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g38670: PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1) (HF=1e-17)
Module size 6 genes
NF 0.69
%ile 91.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.97Zm.18083.1.A1_atBU079763--1e-17At2g38670PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1)O.I.H.G.S.X.
0.8395.60.97Zm.515.1.S1_atAF273767.1protoporphyrinogen IX oxidase-4e-3At5g14220HEMG2O.I.H.G.S.X.
0.7792.10.97Zm.19362.1.S1_atAY111241.1--1e+0At5g13440ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeO.I.H.G.S.X.
0.7792.10.97Zm.9645.1.S1_atAY207047.1ZmMybst1-1e-8At3g16350myb family transcription factorO.I.H.G.S.X.
0.5571.60.97Zm.1960.1.A1_atAW566154palmitoyltransferase swf1-4e-1At3g04970zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.3641.30.97Zm.1974.1.A1_atCF920129--2e+1At5g36100unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.898.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM206332Lower pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig13814_at, orthologous to the query gene, Zm.18083.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9298.4Contig13814_atAt2g38670--6e-13At2g38670PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1)O.I.H.G.S.X.
0.9298.4Contig15086_atAt2g38670--6e-4At5g40570surfeit locus protein 2 family protein / SURF2 family proteinO.I.H.G.S.X.
0.9198.1Contig17040_atAt2g38670--2e-2At3g60490AP2 domain-containing transcription factor TINY, putativeO.I.H.G.S.X.
0.9198.1Contig1924_atAt2g38670--3e-1At4g25020KOW domain-containing protein / D111/G-patch domain-containing proteinO.I.H.G.S.X.
0.9198.1Contig15087_atAt2g38670--8e-3At5g14390-O.I.H.G.S.X.
0.8895.2Contig15990_atAt2g38670--7e+0At2g14910unknown proteinO.I.H.G.S.X.
0.8694.8Contig25757_atAt2g38670--4e+0At5g11680unknown proteinO.I.H.G.S.X.
0.8394.0Contig1606_atAt2g38670--7e-6At3g0423040S ribosomal protein S16 (RPS16B)O.I.H.G.S.X.
0.8293.1HA07a18r_atAt2g38670--4e+0At3g28917MIF2 (MINI ZINC FINGER 2)O.I.H.G.S.X.
0.8192.8Contig26028_atAt2g38670--5e-3At2g01340unknown proteinO.I.H.G.S.X.
0.8192.8EBpi07_SQ002_E06_atAt2g38670--2e+0At1g44835YbaK/prolyl-tRNA synthetase family proteinO.I.H.G.S.X.
0.7991.4Contig16997_atAt2g38670--4e+0At2g38820unknown proteinO.I.H.G.S.X.
0.7790.8EBes01_SQ002_N18_atAt2g38670--2e-1At5g0951040S ribosomal protein S15 (RPS15D)O.I.H.G.S.X.
0.7790.8Contig8260_s_atAt2g38670--2e+0At1g65230unknown proteinO.I.H.G.S.X.
0.7689.8Contig1235_atAt2g38670--4e+0At3g53420PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A)O.I.H.G.S.X.
0.7589.5Contig14594_atAt2g38670--5e-17At5g54080HGO (HOMOGENTISATE 1,2-DIOXYGENASE)O.I.H.G.S.X.
0.7489.1Contig2461_atAt2g38670--4e-38At4g00100ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)O.I.H.G.S.X.
0.7489.1Contig14773_atAt2g38670--4e-1Atmg01370-O.I.H.G.S.X.
0.7489.1Contig2704_s_atAt2g38670--9e-1At5g47175LCR3 (Low-molecular-weight cysteine-rich 3)O.I.H.G.S.X.
0.7187.1Contig12640_atAt2g38670--5e-1At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)O.I.H.G.S.X.
0.7086.0EBes01_SQ003_E20_atAt2g38670--8e-1At3g58550protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.7086.0Contig9708_atAt2g38670--2e-1At4g13100zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6784.7HVSMEm0013G04r2_x_atAt2g38670--5e+0At1g59950aldo/keto reductase, putativeO.I.H.G.S.X.
0.6784.7EBed02_SQ002_A05_atAt2g38670--1e+1At5g67400peroxidase 73 (PER73) (P73) (PRXR11)O.I.H.G.S.X.
0.6681.5HA27O17r_atAt2g38670--1e+0At2g30770CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13)O.I.H.G.S.X.
0.6279.1Contig15825_atAt2g38670--8e+0At5g03020kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.6279.1HA20A06r_atAt2g38670--2e-1At1g61820BGLU46 (BETA GLUCOSIDASE 46)O.I.H.G.S.X.
0.5874.9Contig7953_atAt2g38670--3e-28At2g03510band 7 family proteinO.I.H.G.S.X.
0.5674.3Contig24248_atAt2g38670--1e+0At5g50270F-box family proteinO.I.H.G.S.X.
0.5572.0Contig12750_atAt2g38670--5e-1At5g28630glycine-rich proteinO.I.H.G.S.X.
0.5572.0Contig12094_atAt2g38670--2e+0At3g45960ATEXLA3 (arabidopsis thaliana expansin-like a3)O.I.H.G.S.X.
0.5572.0Contig24733_atAt2g38670--5e+0At3g48840nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.5268.3Contig18848_atAt2g38670--1e-1At4g36780transcription regulatorO.I.H.G.S.X.
0.5268.3Contig15744_atAt2g38670--2e-15At5g19420Ran GTPase binding / chromatin binding / zinc ion bindingO.I.H.G.S.X.
0.5268.3Contig270_atAt2g38670--2e-5At5g63120ethylene-responsive DEAD box RNA helicase, putative (RH30)O.I.H.G.S.X.
0.5066.9Contig9024_s_atAt2g38670--3e+0At5g25310catalyticO.I.H.G.S.X.
0.4963.7Contig14983_atAt2g38670--5e+0At5g30520unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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