Co-expression analysis

Gene ID	Zm.18063.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g53611: unknown protein (HF=2e-1)
Module size	6 genes
NF	0.24
%ile	18.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	79.5	0.96	Zm.18063.1.A1_at	CK986147	-	-	2e-1	At3g53611	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.97	Zm.2407.1.A1_a_at	BM073394	hypothetical protein LOC100191492	-	6e+0	At5g19370	rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein	O.I.	H.G.	S.X.	Please select
0.28	28.1	0.96	Zm.6485.1.A1_at	CB617134	growth-regulating factor 2-like	-	9e-9	At2g22840	AtGRF1 (GROWTH-REGULATING FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.96	Zm.4654.2.A1_a_at	AI737829	hypothetical protein LOC100272406	-	3e+0	At1g21500	unknown protein	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.97	Zm.2792.1.S1_at	CD998237	hypothetical protein LOC100276061	-	8e-10	At5g59960	unknown protein	O.I.	H.G.	S.X.	Please select
0.11	5.3	0.97	Zm.17923.1.A1_at	AY110526.1	hypothetical protein LOC100276264	-	1e-1	At2g44840	ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
19.7	99.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.7	99.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.7	99.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.3	98.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.2	98.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.2	98.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.8	98.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.8	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.2	94.5	GSM320469	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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