Co-expression analysis

Gene ID Zm.18047.1.S1_at
Gene name hypothetical protein LOC100275732
Homology with ArabidopsisSimilar to At5g42250: alcohol dehydrogenase, putative (HF=2e+0)
Module size 6 genes
NF 0.44
%ile 51.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.98Zm.18047.1.S1_atCF623859hypothetical protein LOC100275732-2e+0At5g42250alcohol dehydrogenase, putativeO.I.H.G.S.X.
0.5065.70.98Zm.8376.1.S1_atBM073880hypothetical protein LOC100280303-4e-1At3g4459060S acidic ribosomal protein P2 (RPP2D)O.I.H.G.S.X.
0.4455.70.98Zm.3845.1.A1_atAI711969hypothetical protein LOC100274222-2e-7At5g38470DNA repair protein RAD23, putativeO.I.H.G.S.X.
0.3538.90.98Zm.5237.1.A1_atAY107290.1hypothetical protein LOC100273890-2e-19At1g47260GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2)O.I.H.G.S.X.
0.2928.10.97Zm.9586.1.A1_atBM333269hypothetical protein LOC100276026-7e-1At2g42130unknown proteinO.I.H.G.S.X.
0.2216.90.98Zm.3615.1.A1_atAW330686hypothetical protein LOC100191498-3e-9At1g73670ATMPK15O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.099.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.499.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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