Co-expression analysis

Gene ID Zm.18000.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g31730: GDU1 (GLUTAMINE DUMPER 1) (HF=6e+0)
Module size 6 genes
NF 0.25
%ile 20.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.10.62Zm.18000.1.A1_atCK827977--6e+0At4g31730GDU1 (GLUTAMINE DUMPER 1)O.I.H.G.S.X.
0.4455.70.79Zm.13188.1.A1_atAY103625.1Hypothetical protein LOC100193556-5e-32At3g11940ATRPS5A (RIBOSOMAL PROTEIN 5A)O.I.H.G.S.X.
0.4455.70.85Zm.9456.1.A1_atBM341648hypothetical protein LOC100191738-5e+0At4g28020unknown proteinO.I.H.G.S.X.
0.4048.50.79Zm.17731.1.S1_atCK370453--2e+0At5g51760AHG1 (ABA-hypersensitive germination 1)O.I.H.G.S.X.
0.169.40.72Zm.1801.1.S1_atAY105163.1hypothetical protein LOC100193039-2e-1At5g46780VQ motif-containing proteinO.I.H.G.S.X.
0.083.40.71Zm.17534.1.S1_x_atCK369298hypothetical protein LOC100192824 /// hypothetical protein LOC100192825-2e+0At5g36710unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.997.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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