Co-expression analysis

Gene ID	Zm.17981.1.A1_at
Gene name	hypothetical protein LOC100277738
Homology with Arabidopsis	Similar to At2g47520: AP2 domain-containing transcription factor, putative (HF=5e+0)
Module size	6 genes
NF	0.03
%ile	1.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	94.0	0.89	Zm.17981.1.A1_at	CK827727	hypothetical protein LOC100277738	-	5e+0	At2g47520	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.90	Zm.7818.1.A1_at	CO532783	hypothetical protein LOC100272362	-	2e+1	Atmg01030	-	O.I.	H.G.	S.X.	Please select
0.09	4.0	0.95	Zm.16694.1.A1_a_at	Z14994.1	-	-	2e-11	At5g53740	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	1.5	0.91	Zm.10232.1.A1_at	BM332929	hypothetical protein LOC100192048	-	7e+0	At5g54980	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.03	1.1	0.90	Zm.6307.1.A1_at	AI691328	-	-	7e-32	At2g39770	CYT1 (CYTOKINESIS DEFECTIVE 1)	O.I.	H.G.	S.X.	Please select
0.01	0.3	0.90	Zm.17595.1.A1_a_at	CF019038	-	-	4e-18	At1g04870	PRMT10	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
19.7	99.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.3	99.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.9	99.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.7	99.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.5	99.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.3	98.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.8	98.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.0	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM320460	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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