Co-expression analysis

Gene ID Zm.17971.1.A1_at
Gene name VQ motif family protein
Homology with ArabidopsisSimilar to At5g64820: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.49
%ile 61.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.90Zm.17971.1.A1_atCK827063VQ motif family protein-5e+0At5g64820unknown proteinO.I.H.G.S.X.
0.9199.00.93Zm.3738.1.S1_atBM334767hypothetical protein LOC100191896-6e-1At2g13770unknown proteinO.I.H.G.S.X.
0.6785.80.92Zm.1142.1.A1_atCK827212Hypothetical protein LOC100216781-4e+0At5g56520unknown proteinO.I.H.G.S.X.
0.5571.60.92Zm.1639.3.S1_atBG842159--5e+0At4g22920NYE1 (NON-YELLOWING 1)O.I.H.G.S.X.
0.2521.30.92Zm.18480.1.S1_atCO532822--1e-5At1g08460HDA08O.I.H.G.S.X.
0.1811.60.93Zm.8787.1.A1_atCB350639--3e-1At3g01170structural constituent of ribosomeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.898.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM206325Upper pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1612505_at, orthologous to the query gene, Zm.17971.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9599.61612505_atAt5g64820--2e-5At3g62210EDA32 (embryo sac development arrest 32)O.I.H.G.S.X.
0.5475.71607095_s_atAt5g64820hypothetical protein LOC100258481-2e-18At5g05110cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.5273.91622051_atAt5g64820similar to cyclase-1e-9At4g35220cyclase family proteinO.I.H.G.S.X.
0.5072.71619069_atAt5g64820hypothetical protein LOC100267260-3e-24At2g36330-O.I.H.G.S.X.
0.5072.71618957_atAt5g64820hypothetical protein LOC100263857-6e-27At3g46200aTNUDT9 (Arabidopsis thaliana Nudix hydrolase homolog 9)O.I.H.G.S.X.
0.4767.71610077_atAt5g64820hypothetical protein LOC100264401-4e-38At1g77710-O.I.H.G.S.X.
0.4464.11617472_atAt5g64820hypothetical protein LOC100262721-1e+0At2g10930unknown proteinO.I.H.G.S.X.
0.4361.51606757_atAt5g64820hypothetical protein LOC100262374-4e+0At3g43950phosphotransferase, alcohol group as acceptorO.I.H.G.S.X.
0.4260.11611845_atAt5g64820hypothetical protein LOC100248128-5e-38At3g13235ubiquitin family proteinO.I.H.G.S.X.
0.3954.91615850_s_atAt5g64820hypothetical protein LOC100258165-6e+0At5g05110cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.3853.61611001_atAt5g64820--7e-12At2g26600glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.3751.71608420_atAt5g64820hypothetical protein LOC100247793-8e-86At3g22845emp24/gp25L/p24 protein-relatedO.I.H.G.S.X.
0.3650.71619912_atAt5g64820hypothetical protein LOC100248672 /// hypothetical protein LOC100258262-6e-91At1g29310P-P-bond-hydrolysis-driven protein transmembrane transporterO.I.H.G.S.X.
0.3548.51609739_atAt5g64820hypothetical protein LOC100260961-1e-9At5g52580RAB GTPase activatorO.I.H.G.S.X.
0.3548.51619232_atAt5g64820hypothetical protein LOC100248696-6e-6At3g06420ATG8H (autophagy 8h)O.I.H.G.S.X.
0.3345.71612619_atAt5g64820hypothetical protein LOC100259714-5e-13At5g11680unknown proteinO.I.H.G.S.X.
0.3243.11613772_s_atAt5g64820hypothetical protein LOC100241957-6e-27At5g43060cysteine proteinase, putative / thiol protease, putativeO.I.H.G.S.X.
0.3039.41615588_atAt5g64820hypothetical protein LOC100241835-1e-17At3g62580-O.I.H.G.S.X.
0.2937.71609623_atAt5g64820hypothetical protein LOC100245401-2e+0At5g54870unknown proteinO.I.H.G.S.X.
0.2734.01612872_atAt5g64820hypothetical protein LOC100243801-2e-8At1g07140SIRANBPO.I.H.G.S.X.
0.2632.01610020_atAt5g64820hypothetical protein LOC100260445-2e-114At2g27450NLP1 (NITRILASE-LIKE PROTEIN 1)O.I.H.G.S.X.
0.2428.71613321_atAt5g64820hypothetical protein LOC100244395-5e-49At5g550702-oxoacid dehydrogenase family proteinO.I.H.G.S.X.
0.2428.71608130_atAt5g64820hypothetical protein LOC100248764-2e-4At3g57030strictosidine synthase family proteinO.I.H.G.S.X.
0.1920.91610819_atAt5g64820hypothetical protein LOC100248631-2e-2At1g53000cytidylyltransferase familyO.I.H.G.S.X.
0.1920.91612427_atAt5g64820hypothetical protein LOC100244503-7e-5At1g66750CAK4 (CDK-ACTIVATING KINASE 4)O.I.H.G.S.X.
0.1819.41618962_atAt5g64820hypothetical protein LOC100257791-7e-21At1g34020transporter-relatedO.I.H.G.S.X.
0.1718.21615114_atAt5g64820ripening-related protein-like-8e-19At4g34840ATMTN2O.I.H.G.S.X.
0.1616.71612187_atAt5g64820hypothetical protein LOC100265718-3e-32At3g56490zinc-binding protein, putative / protein kinase C inhibitor, putativeO.I.H.G.S.X.
0.1212.11619964_atAt5g64820hypothetical protein LOC100255474-1e-64At4g21810DER2.1 (DERLIN-2.1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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