Co-expression analysis

Gene ID Zm.17971.1.A1_at
Gene name VQ motif family protein
Homology with ArabidopsisSimilar to At5g64820: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.49
%ile 61.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.90Zm.17971.1.A1_atCK827063VQ motif family protein-5e+0At5g64820unknown proteinO.I.H.G.S.X.
0.9199.00.93Zm.3738.1.S1_atBM334767hypothetical protein LOC100191896-6e-1At2g13770unknown proteinO.I.H.G.S.X.
0.6785.80.92Zm.1142.1.A1_atCK827212Hypothetical protein LOC100216781-4e+0At5g56520unknown proteinO.I.H.G.S.X.
0.5571.60.92Zm.1639.3.S1_atBG842159--5e+0At4g22920NYE1 (NON-YELLOWING 1)O.I.H.G.S.X.
0.2521.30.92Zm.18480.1.S1_atCO532822--1e-5At1g08460HDA08O.I.H.G.S.X.
0.1811.60.93Zm.8787.1.A1_atCB350639--3e-1At3g01170structural constituent of ribosomeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.898.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM206325Upper pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, Gma.15886.1.S1_a_at, orthologous to the query gene, Zm.17971.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.6Gma.15886.1.S1_a_atAt5g64820thioredoxin-9e-2At5g39950ATTRX2 (THIOREDOXIN 2)O.I.H.G.S.X.
0.4057.1Gma.4267.1.S1_atAt5g64820--1e-4At2g46505SDH4O.I.H.G.S.X.
0.1619.7GmaAffx.92081.1.S1_atAt5g64820--1e-3At1g47420-O.I.H.G.S.X.
0.1316.3Gma.5810.2.S1_a_atAt5g64820--2e-79At3g2634020S proteasome beta subunit E, putativeO.I.H.G.S.X.
0.1013.0Gma.11278.1.S1_atAt5g64820--3e-8At2g35900unknown proteinO.I.H.G.S.X.
0.1013.0GmaAffx.59019.1.S1_atAt5g64820--1e-136Atmg00160-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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