Co-expression analysis

Gene ID Zm.17962.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g24600: unknown protein (HF=6e+0)
Module size 10 genes
NF 0.63
%ile 84.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.60.99Zm.17962.1.A1_atCK826755--6e+0At1g24600unknown proteinO.I.H.G.S.X.
0.7590.81.00Zm.9233.1.A1_atBM348207pollen allergen Phl p 2-5e+0At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.7490.31.00ZmAffx.1535.1.S1_at40794996-15--0Atmg01275-O.I.H.G.S.X.
0.7087.00.99ZmAffx.15.1.A1_atAI491598hypothetical protein LOC100279806 /// hypothetical protein LOC100280386-7e+0At5g09370protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.6785.81.00ZmAffx.146.1.A1_atAI66782630S ribosomal protein S31-2e-1At4g21450vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.
0.5775.11.00ZmAffx.1459.1.S1_at11990232-26--6e-148Atcg00430-O.I.H.G.S.X.
0.5571.61.00ZmAffx.1404.1.S1_at40794996-79--1e-3Atmg00690-O.I.H.G.S.X.
0.5065.70.99ZmAffx.180.1.S1_atAI668329--8e-1At1g17235RTFL11 (ROTUNDIFOLIA LIKE 11)O.I.H.G.S.X.
0.4251.31.00ZmAffx.1347.1.S1_s_at40794996-41--2e+0At3g18050unknown proteinO.I.H.G.S.X.
0.3641.30.99ZmAffx.1402.1.S1_at40794996-77--3e+0At3g59680unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.199.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.199.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.999.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.298.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.698.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.598.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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