Co-expression analysis

Gene ID Zm.17950.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g03310: unknown protein (HF=3e-1)
Module size 6 genes
NF 0.53
%ile 68.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.98Zm.17950.1.A1_atCK827767--3e-1At2g03310unknown proteinO.I.H.G.S.X.
0.7389.90.98Zm.4109.1.A1_atCD441071NADP-dependent D-sorbitol-6-phosphate dehydrogenase /// NADP-dependent D-sorbitol-6-phosphate dehydrogenase-7e-38At2g21250mannose 6-phosphate reductase (NADPH-dependent), putativeO.I.H.G.S.X.
0.5976.10.98Zm.4510.3.S1_atAI734509hypothetical protein LOC100193304-2e-1At5g24879unknown proteinO.I.H.G.S.X.
0.5775.10.98Zm.10091.1.A1_atBM382104hypothetical protein LOC100277849-6e+0At4g16520ATG8F (autophagy 8f)O.I.H.G.S.X.
0.4759.90.98ZmAffx.826.1.A1_atAI770514--1e-5At3g13440methyltransferase/ nucleic acid bindingO.I.H.G.S.X.
0.2622.70.99Zm.15979.1.A1_atAW091403hypothetical protein LOC100277589-8e-2At3g10750-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.999.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.099.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.599.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.899.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.599.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.498.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.298.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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