Co-expression analysis

Gene ID Zm.17916.1.S1_at
Gene name hypothetical protein LOC100193759
Homology with ArabidopsisSimilar to At3g03776: hydroxyproline-rich glycoprotein family protein (HF=4e-1)
Module size 6 genes
NF 0.49
%ile 63.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.96Zm.17916.1.S1_atCF633017hypothetical protein LOC100193759-4e-1At3g03776hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.6785.80.96Zm.15732.1.A1_a_atAY104940.1hypothetical protein LOC100280046-6e-9At3g06980DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.6785.80.96Zm.4568.1.A1_atAI734826hypothetical protein LOC100191866-6e-2At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)O.I.H.G.S.X.
0.5674.40.96Zm.10413.1.A1_atBM336637--1e+0At3g50800unknown proteinO.I.H.G.S.X.
0.5065.70.97Zm.5471.1.A1_atBG841029hypothetical protein LOC100273539-3e-38At3g13670protein kinase family proteinO.I.H.G.S.X.
0.136.80.96Zm.16228.2.S1_x_atCF627633hypothetical protein LOC100275186-2e-2At4g17310unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.699.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.599.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.398.9GSM205374B73 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
14.098.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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