Co-expression analysis

Gene ID	Zm.17851.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g06270: unknown protein (HF=5e+0)
Module size	28 genes
NF	0.50
%ile	64.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	96.3	0.95	Zm.17851.1.S1_at	CF018132	-	-	5e+0	At5g06270	unknown protein	O.I.	H.G.	S.X.	Please select
0.68	86.1	0.97	Zm.16076.1.S1_a_at	CF244160	hypothetical protein LOC100191361	-	8e-4	At5g63220	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.95	Zm.3883.1.S1_at	AY105500.1	beta-amylase	-	2e-1	At4g17090	CT-BMY (CHLOROPLAST BETA-AMYLASE)	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.96	Zm.4187.1.S1_at	AY105088.1	-	-	5e-1	At5g45350	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.96	Zm.43.1.S1_a_at	U05226.1	late embryogenesis abundant protein, group 3 /// lea protein group3	-	2e-3	At1g70190	ribosomal protein L12 family protein	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.96	Zm.16076.1.S1_at	CF244160	hypothetical protein LOC100191361	-	8e-4	At5g63220	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.96	Zm.9943.1.A1_at	BI674800	cyclase	-	2e-1	At1g44542	cyclase family protein	O.I.	H.G.	S.X.	Please select
0.56	74.4	0.95	Zm.17645.1.A1_at	CK368768	hypothetical protein LOC100193071	-	3e-10	At4g38900	bZIP protein	O.I.	H.G.	S.X.	Please select
0.56	74.4	0.96	Zm.18462.1.S1_at	CO517427	-	-	1e+0	At4g09550	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	74.4	0.96	Zm.3384.1.A1_x_at	BI319306	subtilisin-chymotrypsin inhibitor CI-1B /// subtilisin-chymotrypsin inhibitor CI-1B	-	9e+0	At5g65687	transporter-related	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.96	Zm.7868.1.S1_at	CF630485	hypothetical protein LOC100216779	-	4e-1	At1g15390	PDF1A (PEPTIDE DEFORMYLASE 1A)	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.96	Zm.1566.1.A1_at	CF031520	-	-	8e-1	At1g75220	integral membrane protein, putative	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.97	Zm.6941.1.A1_at	CF638044	-	-	4e-1	At3g46770	transcriptional factor B3 family protein	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.96	Zm.2538.1.A1_at	BM336091	hypothetical protein LOC100278766	-	4e+0	At4g01935	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.96	Zm.5542.1.S1_at	CO518213	Hypothetical protein LOC100193112	-	7e-4	At3g15140	exonuclease family protein	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.97	Zm.3712.1.S1_at	AW506785	Hypothetical protein LOC100216583	-	6e-2	At1g69430	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.97	Zm.12656.1.S1_at	CF010887	-	-	5e+0	At5g07020	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.98	Zm.18115.1.A1_at	CN845273	ring domain containing protein	-	5e-1	At2g23780	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.97	Zm.7569.1.A1_at	BM347275	-	-	1e+0	At1g69880	ATH8 (thioredoxin H-type 8)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.96	Zm.8100.1.A1_at	AY107723.1	hypothetical protein LOC100192082	-	4e-2	At3g61110	ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.96	Zm.8175.1.A1_at	BM382448	-	-	5e-6	At2g39350	ABC transporter family protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.96	Zm.16102.1.A1_at	CF244374	-	-	8e-9	At5g48530	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.96	Zm.5265.1.A1_at	CD441734	hypothetical protein LOC100191432	-	4e-1	At5g15200	40S ribosomal protein S9 (RPS9B)	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.97	Zm.7728.1.A1_at	BM079644	-	-	3e-3	At2g33700	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.96	Zm.7937.1.A1_at	BM080506	plant viral-response family protein	-	1e+0	At5g19140	AILP1	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.96	Zm.3080.1.A1_at	BM382308	IAA13 - auxin-responsive Aux/IAA family member	-	3e-15	At3g23050	IAA7 (INDOLE-3-ACETIC ACID 7)	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.97	Zm.4278.1.A1_at	AI834022	hypothetical protein LOC100279402	-	1e+1	At5g05550	transcription factor	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.95	Zm.4613.1.A1_at	CK826972	-	-	5e-1	At1g73770	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	95.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.9	95.7	GSM385709	Deep-sowing 10d treatment TIBA, biological rep1	GSE15371	Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
3.9	95.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM206287	Left pulvinus control total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.4	94.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.1	94.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.9	93.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.8	93.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.6	92.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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