Co-expression analysis

Gene ID	Zm.17801.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g23142: - (HF=4e+0)
Module size	7 genes
NF	0.09
%ile	5.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	96.3	0.96	Zm.17801.1.S1_at	CK371451	-	-	4e+0	At2g23142	-	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.97	Zm.7348.1.A1_at	BM078388	hypothetical protein LOC100192468	-	6e-17	At5g13440	ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative	O.I.	H.G.	S.X.	Please select
0.15	8.6	0.98	Zm.14933.1.A1_a_at	CO521741	-	-	2e+0	At5g25940	early nodulin-related	O.I.	H.G.	S.X.	Please select
0.08	3.4	0.98	Zm.2011.1.A1_at	BG840773	cobalt import ATP-binding protein cbiO 2	-	9e-12	At4g33460	ATNAP13	O.I.	H.G.	S.X.	Please select
0.06	2.3	0.97	ZmAffx.561.1.A1_at	AI714590	hypothetical protein LOC100192917	-	3e+0	At4g36100	-	O.I.	H.G.	S.X.	Please select
0.05	1.9	0.97	Zm.4377.1.A1_at	BM333786	ubiquitin-conjugating enzyme E2 J2	-	7e-4	At1g17280	UBC34 (ubiquitin-conjugating enzyme 34)	O.I.	H.G.	S.X.	Please select
0.04	1.5	0.98	Zm.3902.1.S1_at	AY106289.1	-	-	1e+0	At5g55570	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
21.4	99.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.3	99.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.8	98.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.4	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.0	98.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.6	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.3	98.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.8	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.8	93.5	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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