Co-expression analysis

Gene ID	Zm.17773.1.A1_at
Gene name	serine carboxypeptidase 1
Homology with Arabidopsis	Similar to At1g53950: ubiquitin family protein (HF=8e-1)
Module size	8 genes
NF	0.34
%ile	33.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	74.4	0.95	Zm.17773.1.A1_at	CK371251	serine carboxypeptidase 1	-	8e-1	At1g53950	ubiquitin family protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.96	Zm.3517.1.A1_at	CF625889	Grave disease carrier protein	-	2e-2	At1g14560	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.97	Zm.537.1.A1_at	AI065500	hypothetical protein LOC100194026	-	1e-55	At4g02930	elongation factor Tu, putative / EF-Tu, putative	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.95	Zm.17595.1.A1_a_at	CF019038	-	-	4e-18	At1g04870	PRMT10	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.96	Zm.3862.1.S1_at	CF674954	-	-	4e-6	At3g19640	magnesium transporter CorA-like family protein (MRS2-3)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.96	Zm.5574.1.A1_at	CF636602	-	-	2e+0	At1g01520	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.96	Zm.18349.1.A1_at	CO532803	-	-	9e+0	At4g11350	transferase, transferring glycosyl groups	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.96	Zm.18439.1.A1_at	BM267666	nicalin	-	2e-2	At3g44330	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.0	98.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.5	96.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.1	94.3	GSM253279	ZM_8d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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