Co-expression analysis

Gene ID Zm.17762.1.S1_at
Gene name hydrophobic protein LTI6B
Homology with ArabidopsisSimilar to At3g05890: RCI2B (RARE-COLD-INDUCIBLE 2B) (HF=4e-3)
Module size 9 genes
NF 0.20
%ile 15.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5369.10.91Zm.17762.1.S1_atCK369807hydrophobic protein LTI6B-4e-3At3g05890RCI2B (RARE-COLD-INDUCIBLE 2B)O.I.H.G.S.X.
0.3029.80.92Zm.8468.1.A1_atBM074266gibberellin receptor GID1L2-6e+0At3g45480zinc ion bindingO.I.H.G.S.X.
0.2928.10.92Zm.8459.1.A1_atBM078128cell division control protein 50-1e-9At1g16360LEM3 (ligand-effect modulator 3) family protein / CDC50 family proteinO.I.H.G.S.X.
0.2724.60.92Zm.8142.1.A1_atBM080424hypothetical protein LOC100275043-4e-4At1g05420OFP12 (OVATE FAMILY PROTEIN 12)O.I.H.G.S.X.
0.2724.60.92Zm.1666.1.S1_atCF638202Hypothetical protein LOC100191200-7e-1At3g04640glycine-rich proteinO.I.H.G.S.X.
0.2521.30.93Zm.10516.1.S1_atCF009232--5e+0At5g03840TFL1 (TERMINAL FLOWER 1)O.I.H.G.S.X.
0.1710.60.93Zm.7657.1.A1_atBM338496hypothetical protein LOC100278001-1e+0At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)O.I.H.G.S.X.
0.158.60.93Zm.3662.1.A1_s_atAY108718.1hypothetical protein LOC100280024-2e-1At1g22990heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedO.I.H.G.S.X.
0.051.90.92Zm.9440.1.A1_atCF635755snRK1-interacting protein 1-3e-14At5g47870unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.099.1GSM205374B73 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
15.699.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.998.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.798.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM205376B73xMo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
9.898.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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