Co-expression analysis

Gene ID	Zm.17697.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g21030: Dof-type zinc finger domain-containing protein (HF=3e+0)
Module size	6 genes
NF	0.32
%ile	31.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	76.1	0.95	Zm.17697.1.S1_at	CK369496	-	-	3e+0	At4g21030	Dof-type zinc finger domain-containing protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.96	Zm.3591.2.A1_at	AW498095	hypothetical protein LOC100280276	-	5e-2	At3g16500	PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.96	Zm.11178.1.A1_at	AI745736	-	-	5e-1	At5g28490	LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.95	Zm.9765.1.A1_at	BM338217	-	-	4e+0	At5g17310	UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putative	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.96	Zm.2781.1.A1_at	AY106687.1	-	-	5e+0	At4g35480	RHA3B	O.I.	H.G.	S.X.	Please select
0.16	9.4	0.96	Zm.6321.1.A1_at	AI691388	-	-	2e-1	At3g17440	NPSN13 (NOVEL PLANT SNARE 13)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.0	98.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.9	98.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.9	98.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.2	98.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.5	92.6	GSM205365	Mo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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