Co-expression analysis

Gene ID	Zm.17666.1.A1_at
Gene name	hypothetical protein LOC100272483
Homology with Arabidopsis	Similar to At5g25460: unknown protein (HF=2e+0)
Module size	10 genes
NF	0.47
%ile	58.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	81.7	0.96	Zm.17666.1.A1_at	CF635462	hypothetical protein LOC100272483	-	2e+0	At5g25460	unknown protein	O.I.	H.G.	S.X.	Please select
0.64	81.7	0.97	Zm.227.1.S2_x_at	AY109649.1	Ferredoxin-sulfite reductase precursor	-	2e-12	At5g04590	SIR	O.I.	H.G.	S.X.	Please select
0.56	74.4	0.98	Zm.16942.1.A1_at	CO522313	-	-	8e+0	At1g53610	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.98	ZmAffx.534.1.S1_at	AI711770	-	-	3e+0	At3g50651	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.15714.1.S1_a_at	AJ488103.1	transglutaminase	-	7e-2	At4g33660	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.98	Zm.14044.1.A1_at	CO520098	hypothetical protein LOC100275866	-	1e+0	At2g34120	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.98	Zm.16530.2.S1_a_at	BM953031	-	-	1e-69	At3g52590	UBQ1 (UBIQUITIN EXTENSION PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.98	ZmAffx.991.1.A1_at	AI855032	-	-	1e+1	At5g54300	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.97	Zm.17270.6.A1_at	AI833637	hypothetical protein LOC100273578	-	2e-1	At4g05080	F-box family protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.98	ZmAffx.213.1.S1_at	AI670221	-	-	3e+0	At2g32050	cell cycle control protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.9	98.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.0	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.9	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.6	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320467	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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