| Gene ID | Zm.17628.1.S1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At2g34560: katanin, putative (HF=6e-17) |
| Module size | 7 genes |
| NF | 0.61 |
| %ile | 81.3 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.92 | 99.2 | 0.97 | Zm.17628.1.S1_at | CN845468 | - | - | 6e-17 | At2g34560 | katanin, putative | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.97 | Zm.6962.1.S1_at | CA404020 | sorbitol dehydrogenase | - | 2e-1 | At5g51970 | sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.97 | Zm.17366.1.S1_s_at | CK371241 | - | - | 1e+1 | At5g20060 | phospholipase/carboxylesterase family protein | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.97 | Zm.8865.1.A1_at | BM267927 | hypothetical protein LOC100191271 | - | 3e-9 | At5g35460 | unknown protein | O.I. | H.G. | S.X. | |
| 0.57 | 75.1 | 0.97 | Zm.15542.1.S1_at | CD219383 | - | - | 2e-2 | At4g29080 | PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2) | O.I. | H.G. | S.X. | |
| 0.53 | 69.1 | 0.97 | Zm.38.1.S1_at | M60215.1 | ser/thr protein phosphatase1 | - | 1e-12 | At2g29400 | TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1) | O.I. | H.G. | S.X. | |
| 0.32 | 33.4 | 0.97 | Zm.6863.2.A1_at | CF637783 | hypothetical protein LOC100193970 | - | 7e-67 | At1g48410 | AGO1 (ARGONAUTE 1) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 9.9 | 98.3 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.8 | 98.1 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.7 | 98.1 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.6 | 98.1 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.5 | 98.1 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.9 | 97.9 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.7 | 97.9 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.2 | 97.8 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.7 | 97.2 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.8 | 95.5 | GSM206325 | Upper pulvinus 5 min polysomal RNA biorep 2 | GSE8320 | Transcriptional and translational gene regulation in the maize pulvinus | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.73 | 91.1 | Os01g0673500 | At2g34560 | - | Katanin | 6e-45 | At2g34560 | katanin, putative | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | Os03g0152400 | At2g34560 | - | 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)(4-coumaroyl-CoA synthase 1) (Clone 4CL14) (Fragment) | 6e-12 | At4g05160 | 4-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putative | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | Os11g0218000 | At2g34560 | - | Basic-leucine zipper (bZIP) transcription factordomain containing protein | 4e+0 | At4g18501 | unknown protein | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os01g0507300 | At2g34560 | - | - | 5e-8 | At5g19930 | integral membrane family protein | O.I. | H.G. | S.X. | |
| 0.22 | 19.4 | Os08g0530400 | At2g34560 | - | - | 5e-12 | At3g01910 | SOX (SULFITE OXIDASE) | O.I. | H.G. | S.X. | |
| 0.15 | 10.3 | Os05g0358000 | At2g34560 | - | Drought induced 19 family protein | 2e+0 | At3g27040 | meprin and TRAF homology domain-containing protein / MATH domain-containing protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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