Co-expression analysis

Gene ID	Zm.17627.1.A1_at
Gene name	hypothetical protein LOC100272868
Homology with Arabidopsis	Similar to At4g37990: ELI3-2 (ELICITOR-ACTIVATED GENE 3-2) (HF=3e-1)
Module size	11 genes
NF	0.42
%ile	49.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.72	88.6	0.94	Zm.17627.1.A1_at	CK369147	hypothetical protein LOC100272868	-	3e-1	At4g37990	ELI3-2 (ELICITOR-ACTIVATED GENE 3-2)	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.95	Zm.5322.1.A1_at	AY103724.1	hypothetical protein LOC100274445	-	9e-152	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.94	Zm.13622.1.A1_at	AY107434.1	hypothetical protein LOC100274236	-	5e-2	At2g26350	PEX10	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.95	Zm.18409.1.A1_at	CO532665	hypothetical protein LOC100191200	-	5e+0	At5g19510	elongation factor 1B alpha-subunit 2 (eEF1Balpha2)	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.96	Zm.4300.2.S1_a_at	AI881611	hypothetical protein LOC100274411	-	3e-8	At5g09880	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.97	Zm.2617.1.A1_at	AI964629	-	-	9e+0	At4g34190	SEP1 (STRESS ENHANCED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.95	Zm.5265.1.S1_at	CD441734	Hypothetical protein LOC100191432	-	4e-1	At5g15200	40S ribosomal protein S9 (RPS9B)	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.97	Zm.19352.1.S1_at	CO532449	-	-	2e-16	At5g49990	xanthine/uracil permease family protein	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.97	Zm.5922.1.A1_at	CN844887	DNA-binding protein S1FA2	-	2e+0	At1g16250	kelch repeat-containing F-box family protein	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.95	Zm.5789.10.A1_x_at	AI737302	hypothetical protein LOC100192516	-	6e-14	At1g43170	ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.97	Zm.6321.1.A1_at	AI691388	-	-	2e-1	At3g17440	NPSN13 (NOVEL PLANT SNARE 13)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.4	98.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.9	98.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.6	98.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.4	98.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1	98.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.0	98.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.6	92.9	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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