Co-expression analysis

Gene ID Zm.17589.1.A1_at
Gene name protein binding protein
Homology with ArabidopsisSimilar to At1g77830: zinc finger (C3HC4-type RING finger) family protein (HF=3e-2)
Module size 8 genes
NF 0.58
%ile 77.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5775.10.97Zm.17589.1.A1_atCK144401protein binding protein-3e-2At1g77830zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.7087.00.97Zm.10865.1.A1_atCF638037hypothetical protein LOC100275271-1e-6At2g44090-O.I.H.G.S.X.
0.6785.80.97Zm.3611.1.S1_atCA403298choline-phosphate cytidylyltransferase B-2e-22At4g15130catalytic/ choline-phosphate cytidylyltransferase/ nucleotidyltransferaseO.I.H.G.S.X.
0.5775.10.97Zm.264.2.A1_x_atCF012670acetyl-coenzyme A carboxylase-8e+0At5g02890transferase family proteinO.I.H.G.S.X.
0.5674.40.97Zm.4618.1.A1_atAW066311pre-mRNA-splicing factor ISY1-4e-7At3g18790-O.I.H.G.S.X.
0.5369.10.97Zm.24.2.S1_atAJ001635.1viviparous1-3e+0At2g40765unknown proteinO.I.H.G.S.X.
0.5369.10.97Zm.14052.1.A1_atCF036019hypothetical protein LOC100272508-3e-17At2g22400NOL1/NOP2/sun family proteinO.I.H.G.S.X.
0.4048.50.96Zm.3961.1.S1_atCK370362hypothetical protein LOC100272531-3e-7At1g70290ATTPS8O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.799.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.898.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.998.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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