Co-expression analysis

Gene ID	Zm.17576.1.S1_at
Gene name	protein transporter
Homology with Arabidopsis	Similar to At2g38410: VHS domain-containing protein / GAT domain-containing protein (HF=1e+0)
Module size	6 genes
NF	0.70
%ile	91.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.96	Zm.17576.1.S1_at	CO521961	protein transporter	-	1e+0	At2g38410	VHS domain-containing protein / GAT domain-containing protein	O.I.	H.G.	S.X.	Please select
0.83	95.6	0.97	Zm.4862.1.S1_a_at	CF629721	hypothetical protein LOC100273666	-	2e-27	At4g27230	HTA2 (histone H2A)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.12188.1.A1_at	BM382754	-	-	1e+0	At5g51120	PABN1 (POLYADENYLATE-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.17577.1.S1_a_at	AY108847.1	gibberellin-regulated protein 2	-	7e-3	At2g27250	CLV3 (CLAVATA3)	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.96	Zm.6844.1.S1_at	AI065453	hypothetical protein LOC100280071	-	4e-8	At5g36890	BGLU42 (BETA GLUCOSIDASE 42)	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.96	Zm.6774.1.A1_at	CA827779	-	-	7e-1	At5g60100	APRR3 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.6	98.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6	98.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.3	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.2	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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