Co-expression analysis

Gene ID Zm.17568.1.S1_at
Gene name hypothetical protein LOC100193097
Homology with ArabidopsisSimilar to At4g29660: EMB2752 (EMBRYO DEFECTIVE 2752) (HF=1e+1)
Module size 7 genes
NF 0.46
%ile 56.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5571.60.97Zm.17568.1.S1_atBM079997hypothetical protein LOC100193097-1e+1At4g29660EMB2752 (EMBRYO DEFECTIVE 2752)O.I.H.G.S.X.
0.6179.50.97Zm.10219.1.S1_atCK368359Hypothetical LOC542286-2e-10At1g25155anthranilate synthase beta subunit, putativeO.I.H.G.S.X.
0.5571.60.98Zm.1056.1.S1_atAW120162ribosomal protein S22 homolog-3e-17At5g6230040S ribosomal protein S20 (RPS20C)O.I.H.G.S.X.
0.4251.30.97Zm.5922.1.A1_atCN844887DNA-binding protein S1FA2-2e+0At1g16250kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.3336.00.98Zm.17990.1.S1_atBG837629hypothetical protein LOC100275286-2e+0At5g54460wound-responsive protein-relatedO.I.H.G.S.X.
0.3336.00.98Zm.677.1.A1_atAF307152.1diphosphonucleotide phosphatase 2-2e-7At3g14890phosphoesteraseO.I.H.G.S.X.
0.2724.60.98Zm.9975.1.A1_atBM074697--7e-6At5g64200ATSC35O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.598.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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