Co-expression analysis

Gene ID Zm.17558.1.S1_at
Gene name hypothetical protein LOC100273430
Homology with ArabidopsisSimilar to At4g01050: hydroxyproline-rich glycoprotein family protein (HF=5e-5)
Module size 6 genes
NF 0.41
%ile 47.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7188.20.94Zm.17558.1.S1_atCK370895hypothetical protein LOC100273430-5e-5At4g01050hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.6785.80.95Zm.12621.1.A1_atBU051165--4e-9At2g24580sarcosine oxidase family proteinO.I.H.G.S.X.
0.6785.80.97Zm.12129.1.S1_atBM380039--7e-1At1g28330DYL1 (DORMANCY-ASSOCIATED PROTEIN-LIKE 1)O.I.H.G.S.X.
0.4251.30.94Zm.8240.1.A1_atBM073391hypothetical protein LOC100274496-5e+0At5g2390060S ribosomal protein L13 (RPL13D)O.I.H.G.S.X.
0.2521.30.95Zm.1069.1.A1_atAW066696myristoyl-acyl carrier protein thioesterase-4e-1At4g13050acyl-(acyl carrier protein) thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl-(acyl-carrier protein) hydrolase, putative / S-acyl fatty acid synthase thioesterase, putativeO.I.H.G.S.X.
0.158.60.96ZmAffx.830.1.A1_atAI770534--6e+0At5g40930TOM20-4 (TRANSLOCASE OF OUTER MEMBRANE 20-4)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.897.2GSM206304Upper pulvinus 60 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
5.096.7GSM206303Upper pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.995.7GSM206292Upper pulvinus 60 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.695.2GSM206310Lower pulvinus 60 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.695.2GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.595.1GSM206297Lower pulvinus 30 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.494.9GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.394.7GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.394.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM206309Lower pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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