Co-expression analysis

Gene ID	Zm.17510.1.A1_at
Gene name	hypothetical protein LOC100217109
Homology with Arabidopsis	Similar to At1g08970: NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9) (HF=6e-22)
Module size	6 genes
NF	0.29
%ile	26.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.9	0.96	Zm.17510.1.A1_at	CK144409	hypothetical protein LOC100217109	-	6e-22	At1g08970	NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9)	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.96	Zm.4573.1.A1_at	BM340312	hypothetical protein LOC100273245	-	4e-1	At1g02350	protoporphyrinogen oxidase-related	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.96	Zm.19104.1.A1_at	CO522461	hypothetical protein LOC100274465	-	8e-12	At5g22510	beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative	O.I.	H.G.	S.X.	Please select
0.26	22.7	0.96	Zm.2895.7.A1_at	BQ164476	hypothetical protein LOC100275739	-	5e-18	At2g40205	60S ribosomal protein L41 (RPL41C)	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.96	Zm.16289.1.A1_at	BM337131	hypothetical protein LOC100217119	-	2e-2	At4g12110	SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1)	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.96	Zm.9576.1.A1_at	CD999634	iron-sulfur assembly protein IscA	-	3e-4	At1g10500	ATCPISCA (chloroplast-localized IscA-like protein)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.0	99.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.9	98.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.7	98.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.2	96.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.5	96.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.2	96.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.4	94.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.2	94.5	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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