Co-expression analysis

Gene ID	Zm.17497.1.A1_at
Gene name	hypothetical protein LOC100273930
Homology with Arabidopsis	Similar to Atmg00140: - (HF=3e+0)
Module size	6 genes
NF	0.70
%ile	91.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.9	0.98	Zm.17497.1.A1_at	BG266429	hypothetical protein LOC100273930	-	3e+0	Atmg00140	-	O.I.	H.G.	S.X.	Please select
0.83	95.6	0.98	Zm.749.1.S1_at	AY291061.1	photosystem II subunit PsbS1	-	8e-7	At1g44575	NPQ4 (NONPHOTOCHEMICAL QUENCHING)	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.98	Zm.6049.1.A1_at	AY103705.1	-	-	1e-1	At5g02400	PLL2	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.1362.1.S1_at	AW927447	-	-	3e+0	At3g49645	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.6049.3.A1_a_at	AI734480	phosphatidylinositol transporter/ transporter	-	3e-3	At1g76640	calmodulin-related protein, putative	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.98	Zm.6045.2.A1_a_at	BM337093	guanine nucleotide-binding protein beta subunit-like protein	-	2e-10	At1g18080	ATARCA	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.0	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.2	97.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.3	91.7	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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