Co-expression analysis

Gene ID Zm.17366.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At5g20060: phospholipase/carboxylesterase family protein (HF=1e+1)
Module size 7 genes
NF 0.61
%ile 81.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.97Zm.17366.1.S1_s_atCK371241--1e+1At5g20060phospholipase/carboxylesterase family proteinO.I.H.G.S.X.
0.9299.20.97Zm.17628.1.S1_atCN845468--6e-17At2g34560katanin, putativeO.I.H.G.S.X.
0.6785.80.97Zm.6962.1.S1_atCA404020sorbitol dehydrogenase-2e-1At5g51970sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putativeO.I.H.G.S.X.
0.6785.80.97Zm.8865.1.A1_atBM267927hypothetical protein LOC100191271-3e-9At5g35460unknown proteinO.I.H.G.S.X.
0.5775.10.97Zm.15542.1.S1_atCD219383--2e-2At4g29080PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)O.I.H.G.S.X.
0.5369.10.97Zm.38.1.S1_atM60215.1ser/thr protein phosphatase1-1e-12At2g29400TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)O.I.H.G.S.X.
0.3233.40.97Zm.6863.2.A1_atCF637783hypothetical protein LOC100193970-7e-67At1g48410AGO1 (ARGONAUTE 1)O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5775.10.96Zm.6746.1.A1_atCK347370hypothetical protein LOC100279874-2e-3At3g63460WD-40 repeat family proteinO.I.H.G.S.X.
0.5674.40.96Zm.15722.2.A1_atCA404232hypothetical protein LOC100273877-2e+0At3g06110MKP2 (MAPK PHOSPHATASE 2)O.I.H.G.S.X.
0.5267.30.95Zm.8121.1.A1_atCF630483hypothetical protein LOC100276169-3e-2At1g63780IMP4O.I.H.G.S.X.
0.5065.70.94Zm.3882.1.S1_atCF008401hypothetical protein LOC100191197-5e+0At1g07190-O.I.H.G.S.X.
0.5065.70.96Zm.4164.3.A1_atCF636517--6e+0At5g36722unknown proteinO.I.H.G.S.X.
0.5065.70.97Zm.17084.1.S1_atBE056028--3e+0At2g40020-O.I.H.G.S.X.
0.5065.70.97Zm.13856.1.S1_atAF439727.1formate tetrahyrofolate ligase-9e-58At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)O.I.H.G.S.X.
0.4658.40.96Zm.19355.1.A1_atBG549786STIP1 homology and U box-containing protein 1-2e+0At3g14820carboxylesterase/ hydrolase, acting on ester bonds / lipaseO.I.H.G.S.X.
0.4455.70.96Zm.3978.1.A1_atBQ538157--3e-17At1g70320UPL2 (UBIQUITIN-PROTEIN LIGASE 2)O.I.H.G.S.X.
0.4455.70.97Zm.1462.1.S1_atBE050472hypothetical protein LOC100276194-1e+0At5g41760nucleotide-sugar transporter family proteinO.I.H.G.S.X.
0.4455.70.96Zm.13799.1.S1_atAY104897.1hypothetical protein LOC100193902-3e+0At5g13340unknown proteinO.I.H.G.S.X.
0.4352.80.92Zm.17672.1.A1_atCK371019hypothetical protein LOC100276136-9e-2At5g07600oleosin / glycine-rich proteinO.I.H.G.S.X.
0.4048.50.93Zm.3400.1.S1_atCN845120--2e-9At5g17170ENH1 (enhancer of sos3-1)O.I.H.G.S.X.
0.4048.50.96Zm.9659.1.A1_atBM350799--4e-1At1g69510-O.I.H.G.S.X.
0.4048.50.97Zm.13853.1.S1_atAF272753.1kinesin heavy chain-1e-14At1g63640kinesin motor protein-relatedO.I.H.G.S.X.
0.4048.50.97Zm.4304.1.S1_atAI834719--1e-3At3g18600DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.3641.30.97Zm.3497.1.A1_atCF021745hypothetical protein LOC100272844-7e-31At4g31870ATGPX7 (glutathione peroxidase 7)O.I.H.G.S.X.
0.3538.90.95Zm.8270.1.A1_atAY649984.1thioesterase family protein-5e+0At4g35980unknown proteinO.I.H.G.S.X.
0.3538.90.95Zm.12584.4.A1_a_atCD443284hypothetical protein LOC100278662-2e+0At1g76560CP12-3O.I.H.G.S.X.
0.3336.00.94Zm.3269.1.S1_atCD440289hypothetical protein LOC100272834-3e-28At1g01090PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA)O.I.H.G.S.X.
0.3336.00.95Zm.9739.1.A1_atBU582289hypothetical protein LOC100274104-8e-7At3g01410RNase H domain-containing proteinO.I.H.G.S.X.
0.3336.00.96Zm.6763.3.S1_atAY105013.1--1e+0At3g59845NADP-dependent oxidoreductase, putativeO.I.H.G.S.X.
0.3336.00.97Zm.5163.1.S1_atAY108468.1gda-1-7e-20At3g27090-O.I.H.G.S.X.
0.3336.00.97Zm.6170.1.A1_a_atAY107283.1hypothetical protein LOC100274450-1e-5At2g17390AKR2B (ANKYRIN REPEAT-CONTAINING 2B)O.I.H.G.S.X.
0.3336.00.97Zm.14824.1.S1_atAJ430693.1hypothetical protein LOC100217247 /// m26 protein-5e-1At2g16600ROC3O.I.H.G.S.X.
0.3336.00.97Zm.5826.1.A1_atCA402658--9e-1At2g43820UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2)O.I.H.G.S.X.
0.3233.40.93Zm.923.1.S1_atBE519352--2e+0At1g35230AGP5 (ARABINOGALACTAN-PROTEIN 5)O.I.H.G.S.X.
0.3233.40.92ZmAffx.951.1.A1_atAI833422--8e-1At1g60970clathrin adaptor complex small chain family proteinO.I.H.G.S.X.
0.3131.60.95Zm.3665.1.S1_atD88451.1aldehyde oxidase-4e-2At3g43600AAO2 (ALDEHYDE OXIDASE 2)O.I.H.G.S.X.
0.3029.80.94ZmAffx.1184.1.S1_atAW927978hypothetical protein LOC100273162-1e-2At2g38640unknown proteinO.I.H.G.S.X.
0.3029.80.96Zm.17568.1.S1_atBM079997hypothetical protein LOC100193097-1e+1At4g29660EMB2752 (EMBRYO DEFECTIVE 2752)O.I.H.G.S.X.
0.3029.80.94Zm.18410.1.S1_atCO532504--4e-15At2g44770phagocytosis and cell motility protein ELMO1-relatedO.I.H.G.S.X.
0.2928.10.93Zm.13759.2.A1_atCF627386hypothetical protein LOC100279293-7e-3At5g63840RSW3 (RADIAL SWELLING 3)O.I.H.G.S.X.
0.2928.10.94Zm.19285.1.A1_atAI947967hypothetical protein LOC100273235-5e+0At4g25080CHLM (magnesium-protoporphyrin IX methyltransferase)O.I.H.G.S.X.
0.2928.10.94Zm.17965.1.A1_atCK826919--1e+0At3g32160unknown proteinO.I.H.G.S.X.
0.2928.10.95Zm.16448.1.A1_atCF630687--7e-2At1g76180ERD14 (EARLY RESPONSE TO DEHYDRATION 14)O.I.H.G.S.X.
0.2928.10.97Zm.17585.1.S1_atAI467721palmitoyltransferase ZDHHC20-1e-11At4g22750zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.2828.10.94Zm.1183.1.A1_atBG841428hypothetical protein LOC100216904-6e-1At5g20720CPN20 (CHAPERONIN 20)O.I.H.G.S.X.
0.2828.10.94Zm.513.1.S1_atAF250050.1retinoblastoma-related protein 1-2e-6At3g12280RBR1 (RETINOBLASTOMA-RELATED 1)O.I.H.G.S.X.
0.2828.10.95Zm.12634.6.S1_x_atCD446319hypothetical protein LOC100193874-8e-55At3g04400emb2171 (embryo defective 2171)O.I.H.G.S.X.
0.2828.10.96Zm.7938.1.A1_atBM079591glycosyltransferase-7e+0At5g42567-O.I.H.G.S.X.
0.2724.60.96Zm.400.2.S1_atAI677573Pyruvate dehydrogenase (lipoamide) kinase1-3e-28At3g06483PDK (PYRUVATE DEHYDROGENASE KINASE)O.I.H.G.S.X.
0.2724.60.94Zm.8864.1.A1_s_atBM269430hypothetical protein LOC100278083-6e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.H.G.S.X.
0.2724.60.95Zm.1383.1.A1_atBG873830hypothetical protein LOC100275801-1e-7At5g61670-O.I.H.G.S.X.
0.2724.60.96Zm.17395.1.A1_atCK347732hypothetical protein LOC100191730-5e+0At2g22920serine carboxypeptidase S10 family proteinO.I.H.G.S.X.
0.2724.60.96Zm.6815.1.A1_atAY105313.1hypothetical protein LOC100194295-3e-9At1g48605ATHAL3BO.I.H.G.S.X.
0.2724.60.97Zm.18402.1.A1_atCF2436464,5-DOPA dioxygenase extradiol-1e+1At5g60142DNA bindingO.I.H.G.S.X.
0.2724.60.97Zm.5273.1.A1_atBM497669hypothetical protein LOC100272886-7e-1At2g39990EIF2O.I.H.G.S.X.
0.2622.70.97Zm.1056.1.S1_atAW120162ribosomal protein S22 homolog-3e-17At5g6230040S ribosomal protein S20 (RPS20C)O.I.H.G.S.X.
0.2521.30.93Zm.10233.1.A1_atBM341551--3e-29At3g554102-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putativeO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.598.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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