Co-expression analysis

Gene ID Zm.17366.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At5g20060: phospholipase/carboxylesterase family protein (HF=1e+1)
Module size 7 genes
NF 0.61
%ile 81.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.97Zm.17366.1.S1_s_atCK371241--1e+1At5g20060phospholipase/carboxylesterase family proteinO.I.H.G.S.X.
0.9299.20.97Zm.17628.1.S1_atCN845468--6e-17At2g34560katanin, putativeO.I.H.G.S.X.
0.6785.80.97Zm.6962.1.S1_atCA404020sorbitol dehydrogenase-2e-1At5g51970sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putativeO.I.H.G.S.X.
0.6785.80.97Zm.8865.1.A1_atBM267927hypothetical protein LOC100191271-3e-9At5g35460unknown proteinO.I.H.G.S.X.
0.5775.10.97Zm.15542.1.S1_atCD219383--2e-2At4g29080PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)O.I.H.G.S.X.
0.5369.10.97Zm.38.1.S1_atM60215.1ser/thr protein phosphatase1-1e-12At2g29400TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)O.I.H.G.S.X.
0.3233.40.97Zm.6863.2.A1_atCF637783hypothetical protein LOC100193970-7e-67At1g48410AGO1 (ARGONAUTE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.598.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.10024.1.S1_at, orthologous to the query gene, Zm.17366.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.6GmaAffx.10024.1.S1_atAt5g20060--8e-1At5g15460MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)O.I.H.G.S.X.
0.6786.1PsAffx.C14000078_atAt5g20060--4e-1At2g01180ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)O.I.H.G.S.X.
0.6181.8PsAffx.C8000052_atAt5g20060--4e-1At2g15280reticulon family protein (RTNLB10)O.I.H.G.S.X.
0.6080.7PsAffx.C145000027_atAt5g20060--1e+0At3g28220meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.1316.3PsAffx.psZG005xN22f_s_atAt5g20060--9e+0At5g14602unknown proteinO.I.H.G.S.X.
0.058.0PsAffx.C83000002_atAt5g20060--9e-1At3g28980unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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