Co-expression analysis

Gene ID Zm.17361.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g55320: PGP20 (P-GLYCOPROTEIN 20) (HF=5e-19)
Module size 8 genes
NF 0.46
%ile 55.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5875.10.90Zm.17361.1.S1_atCK370908--5e-19At3g55320PGP20 (P-GLYCOPROTEIN 20)O.I.H.G.S.X.
0.6179.50.93Zm.2768.1.A1_atAW067159Hypothetical protein LOC100193535-1e+0At5g04760myb family transcription factorO.I.H.G.S.X.
0.5065.70.94Zm.12977.2.S1_atAI677017Hypothetical protein LOC100193319-5e-5At1g15370-O.I.H.G.S.X.
0.4048.50.94Zm.2986.1.A1_atAF056326.1low phytic acid1-4e-105At4g39800MIPS1 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 1)O.I.H.G.S.X.
0.3641.30.94Zm.5653.1.A1_atBM074926--1e-34At2g37680-O.I.H.G.S.X.
0.3641.30.95Zm.6468.1.A1_atAI692046hypothetical protein LOC100277167-1e-3At1g14440AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31)O.I.H.G.S.X.
0.3336.00.94Zm.12511.1.S1_atAW062063hypothetical protein LOC100276976-5e+0At5g53110-O.I.H.G.S.X.
0.3131.60.94Zm.12936.1.A1_atAY108987.1--7e-1At3g21338unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.899.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.599.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.998.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.398.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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