Co-expression analysis

Gene ID Zm.17357.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g29195: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.15
%ile 9.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.94Zm.17357.1.S1_atCK370769--5e+0At1g29195unknown proteinO.I.H.G.S.X.
0.5065.70.94Zm.376.1.A1_atBM074849Hypoxically induced transcript 2-2e-3At1g05000tyrosine specific protein phosphatase family proteinO.I.H.G.S.X.
0.5065.70.95ZmAffx.566.1.S1_atAI714636--2e-1At5g05610AL1 (ALFIN-LIKE 1)O.I.H.G.S.X.
0.3641.30.94Zm.5732.1.A1_atAY108368.1hypothetical protein LOC100272253-1e+0At1g05780unknown proteinO.I.H.G.S.X.
0.1811.60.94Zm.4705.1.A1_atBG840802--2e-6At1g14980CPN10 (CHAPERONIN 10)O.I.H.G.S.X.
0.031.10.93ZmAffx.238.1.A1_atAI670250--1e+1At3g62140unknown proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6077.80.89ZmAffx.406.1.A1_x_atAI670258--4e-1At2g01505CLE16 (CLAVATA3/ESR-RELATED 16)O.I.H.G.S.X.
0.3336.00.88Zm.4900.2.S1_atAY105715.1hypothetical protein LOC100191441-5e-1At5g28919-O.I.H.G.S.X.
0.3336.00.95Zm.15575.1.A1_atCD448204--4e+0At5g60400unknown proteinO.I.H.G.S.X.
0.2724.60.93Zm.15969.1.S1_atAW497912hypothetical protein LOC100194409-5e-31At1g62430ATCDS1O.I.H.G.S.X.
0.2216.90.92ZmAffx.55.1.A1_atAI665054--3e+0At1g25280AtTLP10 (TUBBY LIKE PROTEIN 10)O.I.H.G.S.X.
0.1710.60.93Zm.6207.2.A1_atBM07865160S ribosomal protein L15-2e-31At4g1739060S ribosomal protein L15 (RPL15B)O.I.H.G.S.X.
0.1710.60.93Zm.7156.2.S1_atAF457947.1Hypothetical protein LOC100193362-1e-12At1g31812ACBP6 (acyl-CoA-binding protein 6)O.I.H.G.S.X.
0.169.40.94Zm.15770.1.S1_atCK827478--3e+0At5g50870UBC27 (ubiquitin-conjugating enzyme 27)O.I.H.G.S.X.
0.169.40.95Zm.2557.2.S1_x_atAY106871.1DNA binding protein-9e-6At4g39100SHL1 (short life)O.I.H.G.S.X.
0.115.30.93Zm.12098.1.A1_atBM382456endo-1,3;1,4-beta-D-glucanase-4e+0At4g01580transcriptional factor B3 family proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.198.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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